RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 CCDC144BQ3MJ40 725 aa13.18□□□□□ -0.3
DDX39B-201ENST00000376177 CCDC158Q5M9N0 1113 aa13.18□□□□□ -0.3
DDX39B-201ENST00000376177 NOC4LQ9BVI4 516 aaKnown RBP13.18□□□□□ -0.3
DDX39B-201ENST00000376177 TMX2Q9Y320 296 aa13.18□□□□□ -0.3
DDX39B-201ENST00000376177 DDX49Q9Y6V7 483 aaKnown RBP13.18□□□□□ -0.3
DDX39B-201ENST00000376177 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-201ENST00000376177 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
DDX39B-201ENST00000376177 POU3F3P20264 500 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-201ENST00000376177 GJA9P57773 515 aa13.18□□□□□ -0.3
DDX39B-201ENST00000376177 CXCL17Q6UXB2 119 aa13.18□□□□□ -0.3
DDX39B-201ENST00000376177 SDR42E1Q8WUS8 393 aa13.18□□□□□ -0.3
DDX39B-201ENST00000376177 ARNTL2Q8WYA1 636 aa13.18□□□□□ -0.3
DDX39B-201ENST00000376177 CCDC8Q9H0W5 538 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-201ENST00000376177 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.18□□□□□ -0.3
DDX39B-201ENST00000376177 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 CFAP54Q96N23 3096 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 DNAJC25-GNG10A0A024R161 153 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 WDR46O15213 610 aaKnown RBP13.17□□□□□ -0.3
DDX39B-201ENST00000376177 B4GALT4O60513 344 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 ATP2A2P16615 1042 aaKnown RBP13.17□□□□□ -0.3
DDX39B-201ENST00000376177 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 ICA1Q05084 483 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 MAMDC4Q6UXC1 1216 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 TMEM179Q6ZVK1 233 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 SLC43A3Q8NBI5 491 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 PCSK9Q8NBP7 692 aaKnown RBP13.17□□□□□ -0.3
DDX39B-201ENST00000376177 HLA-CQ95604 372 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
DDX39B-201ENST00000376177 MTIF3Q9H2K0 278 aaKnown RBP13.17□□□□□ -0.3
DDX39B-201ENST00000376177 MCM9Q9NXL9 1143 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 TANC1Q9C0D5 1861 aa13.17□□□□□ -0.3
DDX39B-201ENST00000376177 GREB1LQ9C091 1923 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-201ENST00000376177 GTPBP6O43824 516 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-201ENST00000376177 LPXNO60711 386 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 GNAI3P08754 354 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 PSMC6P62333 389 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 NHLH1Q02575 133 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 TAP1Q03518 808 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 FAM83BQ5T0W9 1011 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 AGBL1Q96MI9 1066 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 NUP88Q99567 741 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-201ENST00000376177 KATNBL1Q9H079 304 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 PPP1R9AQ9ULJ8 1098 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 COG5Q9UP83 839 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 LCTP09848 1927 aa13.16□□□□□ -0.3
DDX39B-201ENST00000376177 CYP2D7A0A087X1C5 515 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 EEF2P13639 858 aaKnown RBP13.15□□□□□ -0.3
DDX39B-201ENST00000376177 GRB10Q13322 594 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 TMEM67Q5HYA8 995 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 SNRNP48Q6IEG0 339 aaKnown RBP13.15□□□□□ -0.3
DDX39B-201ENST00000376177 DEFB128Q7Z7B8 93 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 PPP1R13LQ8WUF5 828 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 ZNF512BQ96KM6 892 aaPredicted RBP13.15□□□□□ -0.3
DDX39B-201ENST00000376177 UIMC1Q96RL1 719 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 PHOX2BQ99453 314 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 ARHGEF10LQ9HCE6 1279 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 GPR108Q9NPR9 543 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 MYH4Q9Y623 1939 aa13.15□□□□□ -0.3
DDX39B-201ENST00000376177 MAGEB6P1A0A0J9YX57 407 aa13.14□□□□□ -0.31
DDX39B-201ENST00000376177 RAD21O60216 631 aa13.14□□□□□ -0.31
DDX39B-201ENST00000376177 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
DDX39B-201ENST00000376177 GSE1Q14687 1217 aa13.14□□□□□ -0.31
DDX39B-201ENST00000376177 ARMCX2Q7L311 632 aa13.14□□□□□ -0.31
DDX39B-201ENST00000376177 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
DDX39B-201ENST00000376177 FBXL18Q96ME1 805 aa13.14□□□□□ -0.31
DDX39B-201ENST00000376177 PRR33A8MZF0 331 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 LCORLQ8N3X6 602 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 MSL3Q8N5Y2 521 aaKnown RBP13.13□□□□□ -0.31
DDX39B-201ENST00000376177 EAF2Q96CJ1 260 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-201ENST00000376177 DCP1AQ9NPI6 582 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-201ENST00000376177 TRIP12Q14669 1992 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-201ENST00000376177 PRKAB2O43741 272 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 BCAR3O75815 825 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 GNAI2P04899 355 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 CYP2C9P11712 490 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 POLA2Q14181 598 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 BECN1Q14457 450 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 TMCO2Q7Z6W1 182 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-201ENST00000376177 GDPD5Q8WTR4 605 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 ABHD16BQ9H3Z7 469 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 SPC25Q9HBM1 224 aa13.13□□□□□ -0.31
DDX39B-201ENST00000376177 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
DDX39B-201ENST00000376177 SIP14410 1827 aa13.12□□□□□ -0.31
DDX39B-201ENST00000376177 LCHNA4D1U4 455 aa13.12□□□□□ -0.31
DDX39B-201ENST00000376177 CT47B1P0C2W7 299 aaPredicted RBP13.12□□□□□ -0.31
DDX39B-201ENST00000376177 IL9P15248 144 aa13.12□□□□□ -0.31
DDX39B-201ENST00000376177 NKX3-2P78367 333 aa13.12□□□□□ -0.31
DDX39B-201ENST00000376177 CNTN2Q02246 1040 aa13.12□□□□□ -0.31
DDX39B-201ENST00000376177 OS9Q13438 667 aaPredicted RBP13.12□□□□□ -0.31
DDX39B-201ENST00000376177 CPXCR1Q8N123 301 aa13.12□□□□□ -0.31
DDX39B-201ENST00000376177 GNEQ9Y223 722 aaKnown RBP13.12□□□□□ -0.31
DDX39B-201ENST00000376177 ZNF318Q5VUA4 2279 aa13.12□□□□□ -0.31
DDX39B-201ENST00000376177 CHGBP05060 677 aa13.11□□□□□ -0.31
DDX39B-201ENST00000376177 PDE6AP16499 860 aa13.11□□□□□ -0.31
DDX39B-201ENST00000376177 NOL8Q76FK4 1167 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms