RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 AFG3L2Q9Y4W6 797 aa12.05□□□□□ -0.48
PDPN-203ENST00000376061 SPDYE5A6NIY4 337 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 BTBD18B2RXH4 712 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 hCG_1984214I3L0E3 225 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 ZBTB5O15062 677 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 PLA2G6O60733 806 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 U2AF2P26368 475 aaKnown RBP eCLIP12.04□□□□□ -0.48
PDPN-203ENST00000376061 CALML3P27482 149 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 KRT2P35908 639 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 HMGCS2P54868 508 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 NAPAP54920 295 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 NLRP5P59047 1200 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 QRICH1Q2TAL8 776 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 LDLRAD1Q5T700 205 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 PPP1R18Q6NYC8 613 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 ZNF713Q8N859 430 aaPredicted RBP12.04□□□□□ -0.48
PDPN-203ENST00000376061 OXER1Q8TDS5 423 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 FOXP1Q9H334 677 aaPredicted RBP12.04□□□□□ -0.48
PDPN-203ENST00000376061 ZNF408Q9H9D4 720 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 FBXO28Q9NVF7 368 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 FEM1BQ9UK73 627 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 CNPY2Q9Y2B0 182 aa12.04□□□□□ -0.48
PDPN-203ENST00000376061 SMCHD1A6NHR9 2005 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 ESYT2A0FGR8 921 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 DDX11L8A8MPP1 907 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 C19orf81C9J6K1 198 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 ADAMTS3O15072 1205 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 NCLP19338 710 aaKnown RBP12.03□□□□□ -0.48
PDPN-203ENST00000376061 SNAP25P60880 206 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 KRT85P78386 507 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 NR5A1Q13285 461 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 GNL2Q13823 731 aaKnown RBP12.03□□□□□ -0.48
PDPN-203ENST00000376061 ERO1BQ86YB8 467 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 NOSTRINQ8IVI9 506 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 DAGLBQ8NCG7 672 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 CCDC12Q8WUD4 166 aaPredicted RBP12.03□□□□□ -0.48
PDPN-203ENST00000376061 CHURC1Q8WUH1 139 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 TNFRSF25Q93038 417 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 COA7Q96BR5 231 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 TANGO6Q9C0B7 1094 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
PDPN-203ENST00000376061 BRMS1Q9HCU9 246 aa12.03□□□□□ -0.48
PDPN-203ENST00000376061 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
PDPN-203ENST00000376061 FIBPO43427 364 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 PPATQ06203 517 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 PPIL2Q13356 520 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 SH3D19Q5HYK7 790 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 MYSM1Q5VVJ2 828 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 GALNT17Q6IS24 598 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 TMEM87AQ8NBN3 555 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 RBM46Q8TBY0 533 aaKnown RBP12.02□□□□□ -0.49
PDPN-203ENST00000376061 KIFC2Q96AC6 838 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 SLF1Q9BQI6 1058 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 FTOQ9C0B1 505 aaKnown RBP eCLIP12.02□□□□□ -0.49
PDPN-203ENST00000376061 ZMYND12Q9H0C1 365 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 RANBP17Q9H2T7 1088 aaKnown RBP12.02□□□□□ -0.49
PDPN-203ENST00000376061 GDPD2Q9HCC8 539 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 METRNQ9UJH8 293 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 PCDHA4Q9UN74 947 aa12.02□□□□□ -0.49
PDPN-203ENST00000376061 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 GOLGA6L22H0YM25 854 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 M0R2N6 131 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
PDPN-203ENST00000376061 TAL1P17542 331 aaPredicted RBP12.01□□□□□ -0.49
PDPN-203ENST00000376061 FKBP1BP68106 108 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 EARS2Q5JPH6 523 aaKnown RBP12.01□□□□□ -0.49
PDPN-203ENST00000376061 FBXO11Q86XK2 927 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 BLIDQ8IZY5 108 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 OPTNQ96CV9 577 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 USP28Q96RU2 1077 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 GBA2Q9HCG7 927 aaPredicted RBP12.01□□□□□ -0.49
PDPN-203ENST00000376061 TMOD4Q9NZQ9 345 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 TFIP11Q9UBB9 837 aaKnown RBP12.01□□□□□ -0.49
PDPN-203ENST00000376061 PPP1R9AQ9ULJ8 1098 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 KCNH4Q9UQ05 1017 aa12.01□□□□□ -0.49
PDPN-203ENST00000376061 A0A0G2JLL6 359 aaPredicted RBP12□□□□□ -0.49
PDPN-203ENST00000376061 SMCO2A6NFE2 343 aa12□□□□□ -0.49
PDPN-203ENST00000376061 UNCXA6NJT0 531 aa12□□□□□ -0.49
PDPN-203ENST00000376061 IRF6O14896 467 aa12□□□□□ -0.49
PDPN-203ENST00000376061 FLOT1O75955 427 aa12□□□□□ -0.49
PDPN-203ENST00000376061 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
PDPN-203ENST00000376061 GJA5P36382 358 aa12□□□□□ -0.49
PDPN-203ENST00000376061 ADCY7P51828 1080 aa12□□□□□ -0.49
PDPN-203ENST00000376061 NOM1Q5C9Z4 860 aaKnown RBP12□□□□□ -0.49
PDPN-203ENST00000376061 ATL3Q6DD88 541 aa12□□□□□ -0.49
PDPN-203ENST00000376061 PRRT2Q7Z6L0 340 aaPredicted RBP12□□□□□ -0.49
PDPN-203ENST00000376061 PRPF38AQ8NAV1 312 aaKnown RBP12□□□□□ -0.49
PDPN-203ENST00000376061 RASGRP4Q8TDF6 673 aa12□□□□□ -0.49
PDPN-203ENST00000376061 ZNF396Q96N95 335 aaPredicted RBP12□□□□□ -0.49
PDPN-203ENST00000376061 AMNQ9BXJ7 453 aa12□□□□□ -0.49
PDPN-203ENST00000376061 C6orf50Q9HD87 102 aa12□□□□□ -0.49
PDPN-203ENST00000376061 LMBRD1Q9NUN5 540 aa12□□□□□ -0.49
PDPN-203ENST00000376061 PCDHA1Q9Y5I3 950 aa12□□□□□ -0.49
PDPN-203ENST00000376061 MYH7BA7E2Y1 1941 aa11.99□□□□□ -0.49
PDPN-203ENST00000376061 ELP1O95163 1332 aa11.99□□□□□ -0.49
PDPN-203ENST00000376061 GNA11P29992 359 aa11.99□□□□□ -0.49
PDPN-203ENST00000376061 TOB1P50616 345 aaPredicted RBP11.99□□□□□ -0.49
PDPN-203ENST00000376061 NBR1Q14596 966 aa11.99□□□□□ -0.49
PDPN-203ENST00000376061 USH1GQ495M9 461 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms