RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 OSBPL5Q9H0X9 879 aaPredicted RBP12.72□□□□□ -0.37
PTCH1-203ENST00000375274 PARP2Q9UGN5 583 aa12.72□□□□□ -0.37
PTCH1-203ENST00000375274 IGKV5-2P06315 115 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 RASSF7Q02833 373 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 TTLL12Q14166 644 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-203ENST00000375274 USH1GQ495M9 461 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 EPHA10Q5JZY3 1008 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 FYB2Q5VWT5 728 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 FMR1NBQ8N0W7 255 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-203ENST00000375274 DPH5Q9H2P9 285 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 SH2D4AQ9H788 454 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 HOMER3Q9NSC5 361 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 PNPLA6Q8IY17 1366 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 HARSP12081 509 aaKnown RBP12.71□□□□□ -0.37
PTCH1-203ENST00000375274 ZNF658Q5TYW1 1059 aaPredicted RBP12.71□□□□□ -0.37
PTCH1-203ENST00000375274 AGTPBP1Q9UPW5 1226 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 EFCAB6Q5THR3 1501 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 NDUFA10O95299 355 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 CFBP00751 764 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 ADAM9Q13443 819 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 CASP8Q14790 479 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 TBC1D22AQ8WUA7 517 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 P2RX5Q93086 422 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 EPSTI1Q96J88 318 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 EXOC7Q9UPT5 735 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 COMMD10Q9Y6G5 202 aa12.71□□□□□ -0.37
PTCH1-203ENST00000375274 KRT15P19012 456 aa12.71□□□□□ -0.38
PTCH1-203ENST00000375274 SLFNL1Q499Z3 407 aa12.71□□□□□ -0.38
PTCH1-203ENST00000375274 RASGRP4Q8TDF6 673 aa12.71□□□□□ -0.38
PTCH1-203ENST00000375274 MAP3K4Q9Y6R4 1608 aa12.71□□□□□ -0.38
PTCH1-203ENST00000375274 MED14O60244 1454 aa12.71□□□□□ -0.38
PTCH1-203ENST00000375274 PRKAB2O43741 272 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 EPHB4P54760 987 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 GOLPH3LQ9H4A5 285 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 PANK4Q9NVE7 773 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 CCNL1Q9UK58 526 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-203ENST00000375274 FAM170AA1A519 330 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 NEDD9Q14511 834 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 LMNTD2Q8IXW0 634 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 PSTPIP2Q9H939 334 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 ARHGEF10LQ9HCE6 1279 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 IQGAP3Q86VI3 1631 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 LAD1O00515 517 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 HNRNPH2P55795 449 aaKnown RBP12.7□□□□□ -0.38
PTCH1-203ENST00000375274 TTC19Q6DKK2 380 aaPredicted RBP12.7□□□□□ -0.38
PTCH1-203ENST00000375274 RWDD2AQ9UIY3 292 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 ERBB3P21860 1342 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 PTPREP23469 700 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 ZBED6P86452 979 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 MFSD14BQ5SR56 506 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 HHATQ5VTY9 493 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 TPH2Q8IWU9 490 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 KRT12Q99456 494 aa12.7□□□□□ -0.38
PTCH1-203ENST00000375274 METTL14Q9HCE5 456 aaKnown RBP12.7□□□□□ -0.38
PTCH1-203ENST00000375274 STX2P32856 288 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 KMT5BQ4FZB7 885 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 ANKRD42Q8N9B4 389 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 MGARPQ8TDB4 240 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 AK8Q96MA6 479 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 MAK16Q9BXY0 300 aaKnown RBP12.69□□□□□ -0.38
PTCH1-203ENST00000375274 PPP1R12CQ9BZL4 782 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 ABCB6Q9NP58 842 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 FAM184BQ9ULE4 1060 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 HEXIM1O94992 359 aaKnown RBP12.69□□□□□ -0.38
PTCH1-203ENST00000375274 FNBP4Q8N3X1 1017 aaPredicted RBP12.69□□□□□ -0.38
PTCH1-203ENST00000375274 LARP4BQ92615 738 aaKnown RBP12.69□□□□□ -0.38
PTCH1-203ENST00000375274 PLEKHG1Q9ULL1 1385 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 USP27XA6NNY8 438 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 DDX39AO00148 427 aaKnown RBP12.69□□□□□ -0.38
PTCH1-203ENST00000375274 MFAP3LO75121 409 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 CYP2J2P51589 502 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 CCDC170Q8IYT3 715 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 ARHGEF2Q92974 986 aaKnown RBP12.69□□□□□ -0.38
PTCH1-203ENST00000375274 MCUR1Q96AQ8 359 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 ASAP1Q9ULH1 1129 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 USTQ9Y2C2 406 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 JRKLQ9Y4A0 524 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 FAM169AQ9Y6X4 670 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 ZNF131P52739 623 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 CYP27A1Q02318 531 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 MAN2A1Q16706 1144 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 RBM26Q5T8P6 1007 aaKnown RBP12.69□□□□□ -0.38
PTCH1-203ENST00000375274 RESP18Q5W5W9 173 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 ADAT2Q7Z6V5 191 aaKnown RBP12.69□□□□□ -0.38
PTCH1-203ENST00000375274 LCORLQ8N3X6 602 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 MAIP1Q8WWC4 291 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 PAGE5Q96GU1 130 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 EPB41L5Q9HCM4 733 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 ADAM21Q9UKJ8 722 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 ARHGAP31Q2M1Z3 1444 aa12.69□□□□□ -0.38
PTCH1-203ENST00000375274 SHROOM2Q13796 1616 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 H7C1W4 665 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 MYL1P05976 194 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 IRX5P78411 483 aaPredicted RBP12.68□□□□□ -0.38
PTCH1-203ENST00000375274 FKBP3Q00688 224 aaKnown RBP12.68□□□□□ -0.38
PTCH1-203ENST00000375274 EXOC3L4Q17RC7 722 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 DCUN1D2Q6PH85 259 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 PCDHA4Q9UN74 947 aa12.68□□□□□ -0.38
PTCH1-203ENST00000375274 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms