RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 KIFAP3Q92845 792 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 KLF18A0A0U1RQI7 1052 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 DENND3A2RUS2 1198 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 WHAMMP3Q1A5X7 153 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 GIMAP6Q6P9H5 292 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 ZNF365Q70YC5 407 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 CDAN1Q8IWY9 1227 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 GTF3C2Q8WUA4 911 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-202ENST00000374541 MAIP1Q8WWC4 291 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 NAPGQ99747 312 aaPredicted RBP6.96□□□□□ -1.3
PTPN3-202ENST00000374541 HAUS2Q9NVX0 235 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 CPA4Q9UI42 421 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 HCN4Q9Y3Q4 1203 aa6.96□□□□□ -1.3
PTPN3-202ENST00000374541 SPP2Q13103 211 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 ZNF569Q5MCW4 686 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L2Q6R6M4 530 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 Q9H521 79 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 MMRN2Q9H8L6 949 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 LUC7L3O95232 432 aaKnown RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 RASA3Q14644 834 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 AXIN2Q9Y2T1 843 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 TRPM1Q7Z4N2 1603 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 MYPNQ86TC9 1320 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 EYA2O00167 538 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 SMARCA5O60264 1052 aaPredicted RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 XRCC6P12956 609 aaKnown RBP eCLIP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 GKAP1Q5VSY0 366 aaPredicted RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 NUP58Q9BVL2 599 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 RTEL1Q9NZ71 1219 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 ATP7BP35670 1465 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 AKR1B15C9JRZ8 316 aaPredicted RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 SEMA3EO15041 775 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 CRCPO75575 148 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 MBD4O95243 580 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 ARPP19P56211 112 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 MYL5Q02045 173 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 SUSD4Q5VX71 490 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 C8orf74Q6P047 294 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 CRAMP1Q96RY5 1269 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 DACT1Q9NYF0 836 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 THEGQ9P2T0 379 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 GOLGA6CA6NDK9 693 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 DNAJC8O75937 253 aaPredicted RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 GOLGA6DP0CG33 693 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 EVCP57679 992 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 NFX1Q12986 1120 aaKnown RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 PAK2Q13177 524 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 SDCCAG8Q86SQ7 713 aaPredicted RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 UBL4BQ8N7F7 174 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 IQUBQ8NA54 791 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 DHX36Q9H2U1 1008 aaKnown RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 BICC1Q9H694 974 aaKnown RBP6.95□□□□□ -1.3
PTPN3-202ENST00000374541 GOLGA6AQ9NYA3 693 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 GUCA1BQ9UMX6 200 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 ADGRB3O60242 1522 aa6.95□□□□□ -1.3
PTPN3-202ENST00000374541 I3L4J1 428 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 RGL2O15211 777 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 UBXN1Q04323 297 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 RAB11FIP4Q86YS3 637 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 SMC5Q8IY18 1101 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 UBLCP1Q8WVY7 318 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 BRF1Q92994 677 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 DNAJC25Q9H1X3 360 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 FAM204AQ9H8W3 233 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 LARSQ9P2J5 1176 aaKnown RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 PI4KBQ9UBF8 816 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 PARP2Q9UGN5 583 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 AKT3Q9Y243 479 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 ERBB4Q15303 1308 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 DIP2CQ9Y2E4 1556 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 SH3BP5O60239 455 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 PCCAP05165 728 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 CACNB3P54284 484 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 NBPF10Q6P3W6 841 aaKnown RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 IFT81Q8WYA0 676 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 SENP6Q9GZR1 1112 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 IMPACTQ9P2X3 320 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 TTC41PQ6P2S7 1318 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 DCCP43146 1447 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 TLDC2A0PJX2 215 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 CHMP2AO43633 222 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 PPP2R5EQ16537 467 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 CCDC122Q5T0U0 273 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 LIN9Q5TKA1 542 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 KRBA2Q6ZNG9 492 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 CTU1Q7Z7A3 348 aaKnown RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 VSIG1Q86XK7 387 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 RNF10Q8N5U6 811 aaKnown RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 FAM161BQ96MY7 647 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 PSMD1Q99460 953 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 BAG1Q99933 345 aaPredicted RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 SEC31BQ9NQW1 1179 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 MRPL11Q9Y3B7 192 aaKnown RBP6.94□□□□□ -1.3
PTPN3-202ENST00000374541 USP17L10C9JJH3 530 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 GNA11P29992 359 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 SLC8A1P32418 973 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 SLC8A3P57103 927 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 TFCP2Q12800 502 aa6.94□□□□□ -1.3
PTPN3-202ENST00000374541 FAM160B1Q5W0V3 765 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms