RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 QRICH1Q2TAL8 776 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 SMCR8Q8TEV9 937 aaPredicted RBP10.54□□□□□ -0.72
PTPN20-201ENST00000374218 BRI3BPQ8WY22 251 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 PARK7Q99497 189 aaKnown RBP10.54□□□□□ -0.72
PTPN20-201ENST00000374218 GLT8D2Q9H1C3 349 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 ASCC2Q9H1I8 757 aaPredicted RBP10.54□□□□□ -0.72
PTPN20-201ENST00000374218 RANBP17Q9H2T7 1088 aaKnown RBP10.54□□□□□ -0.72
PTPN20-201ENST00000374218 BRMS1Q9HCU9 246 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
PTPN20-201ENST00000374218 CIZ1Q9ULV3 898 aaPredicted RBP10.54□□□□□ -0.72
PTPN20-201ENST00000374218 ATAD5Q96QE3 1844 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 hCG_1642624A0A1W2PR95 340 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 PDHXO00330 501 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 VWA5AO00534 786 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 FDPSP14324 419 aaKnown RBP10.54□□□□□ -0.72
PTPN20-201ENST00000374218 CALML3P27482 149 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 NUCB2P80303 420 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 CAPNS2Q96L46 248 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 SLC38A10Q9HBR0 1119 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 PCDHA1Q9Y5I3 950 aa10.54□□□□□ -0.72
PTPN20-201ENST00000374218 BTBD19C9JJ37 291 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 GNA11P29992 359 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 NAPAP54920 295 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 MOGSQ13724 837 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 GALNT17Q6IS24 598 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 CYP4F22Q6NT55 531 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 GPAT2Q6NUI2 795 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 PPP1R18Q6NYC8 613 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 MYH4Q9Y623 1939 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 ALDH1A1P00352 501 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 ICAM1P05362 532 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 GCLCP48506 637 aaPredicted RBP10.53□□□□□ -0.72
PTPN20-201ENST00000374218 NLRP5P59047 1200 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 HERVK_113P62684 666 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 GNL2Q13823 731 aaKnown RBP10.53□□□□□ -0.72
PTPN20-201ENST00000374218 PKN1Q16512 942 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 CCDC174Q6PII3 467 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 LBX2Q6XYB7 198 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 FBXO18Q8NFZ0 1043 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 BICD2Q8TD16 824 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 ATG4CQ96DT6 458 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 P2RX7Q99572 595 aaKnown RBP10.53□□□□□ -0.72
PTPN20-201ENST00000374218 C6orf50Q9HD87 102 aa10.53□□□□□ -0.72
PTPN20-201ENST00000374218 MRPL11Q9Y3B7 192 aaKnown RBP10.53□□□□□ -0.72
PTPN20-201ENST00000374218 OTOFQ9HC10 1997 aa10.52□□□□□ -0.72
PTPN20-201ENST00000374218 SPDYE16A6NNV3 312 aaPredicted RBP10.52□□□□□ -0.72
PTPN20-201ENST00000374218 FAM155AB1AL88 458 aaPredicted RBP10.52□□□□□ -0.72
PTPN20-201ENST00000374218 STX6O43752 255 aa10.52□□□□□ -0.72
PTPN20-201ENST00000374218 SYT1P21579 422 aa10.52□□□□□ -0.72
PTPN20-201ENST00000374218 SLC35G1Q2M3R5 365 aa10.52□□□□□ -0.72
PTPN20-201ENST00000374218 CPXCR1Q8N123 301 aa10.52□□□□□ -0.72
PTPN20-201ENST00000374218 CCPG1Q9ULG6 757 aa10.52□□□□□ -0.72
PTPN20-201ENST00000374218 ADAMTS5Q9UNA0 930 aa10.52□□□□□ -0.72
PTPN20-201ENST00000374218 WDR33Q9C0J8 1336 aaKnown RBP10.52□□□□□ -0.72
PTPN20-201ENST00000374218 VPS37CA5D8V6 355 aaPredicted RBP10.52□□□□□ -0.73
PTPN20-201ENST00000374218 COPB2P35606 906 aa10.52□□□□□ -0.73
PTPN20-201ENST00000374218 MRPL12P52815 198 aaKnown RBP10.52□□□□□ -0.73
PTPN20-201ENST00000374218 TEX13BQ9BXU2 312 aa10.52□□□□□ -0.73
PTPN20-201ENST00000374218 CHMP5Q9NZZ3 219 aa10.52□□□□□ -0.73
PTPN20-201ENST00000374218 RABGAP1Q9Y3P9 1069 aa10.52□□□□□ -0.73
PTPN20-201ENST00000374218 ABCB11O95342 1321 aa10.52□□□□□ -0.73
PTPN20-201ENST00000374218 ATP2A1O14983 1001 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 MAP2K2P36507 400 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 TM4SF4P48230 202 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 CCNA1P78396 465 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 KIF23Q02241 960 aaPredicted RBP10.51□□□□□ -0.73
PTPN20-201ENST00000374218 PLS1Q14651 629 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 TKFCQ3LXA3 575 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 WWC2Q6AWC2 1192 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 IFNL1Q8IU54 200 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.73
PTPN20-201ENST00000374218 VPS54Q9P1Q0 977 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 DTNBO60941 627 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 STAT3P40763 770 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 FOSBP53539 338 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 SNAP25P60880 206 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 USH1GQ495M9 461 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 KRT40Q6A162 431 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 MCTP2Q6DN12 878 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 MCF2L2Q86YR7 1114 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 CCAR1Q8IX12 1150 aaKnown RBP10.51□□□□□ -0.73
PTPN20-201ENST00000374218 FAM43AQ8N2R8 423 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 RAVER2Q9HCJ3 691 aaKnown RBP10.51□□□□□ -0.73
PTPN20-201ENST00000374218 ESYT2A0FGR8 921 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 SMCO2A6NFE2 343 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 STXBP3O00186 592 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 TAF1CQ15572 869 aaPredicted RBP10.51□□□□□ -0.73
PTPN20-201ENST00000374218 MCTP1Q6DN14 999 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 CUL5Q93034 780 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 COA7Q96BR5 231 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 AIFM3Q96NN9 605 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 PTPN18Q99952 460 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 PSTPIP2Q9H939 334 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 ZFYVE28Q9HCC9 887 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 ATP6V1DQ9Y5K8 247 aa10.51□□□□□ -0.73
PTPN20-201ENST00000374218 SLC25A27O95847 323 aa10.5□□□□□ -0.73
PTPN20-201ENST00000374218 ADCY7P51828 1080 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms