RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 STXBP3O00186 592 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 RIMBP2O15034 1052 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 SERPINC1P01008 464 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 MMP10P09238 476 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 UBA7P41226 1012 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 UBASH3AP57075 661 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 TUBB4BP68371 445 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 TRIM14Q14142 442 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 TMEM266Q2M3C6 531 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 SPATA1Q5VX52 437 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 NAP1L5Q96NT1 182 aaPredicted RBP9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 PSMD1Q99460 953 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 USP40Q9NVE5 1235 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 HERC5Q9UII4 1024 aaKnown RBP9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 ATRNL1Q5VV63 1379 aa9.87□□□□□ -0.83
SNRNP40-202ENST00000373720 H7C1D1 291 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 ZSCAN12O43309 604 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 FOSP01100 380 aaPredicted RBP9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 TPM1P09493 284 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 CYP2D6P10635 497 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 NAPAP54920 295 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 FANCCQ00597 558 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 DPYDQ12882 1025 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 SLC15A2Q16348 729 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 TPRNQ4KMQ1 711 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 TATDN1Q6P1N9 297 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 CNNM4Q6P4Q7 775 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 PIK3AP1Q6ZUJ8 805 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 TMEM179Q6ZVK1 233 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 NEK8Q86SG6 692 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 C2CD5Q86YS7 1000 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 REXO1Q8N1G1 1221 aaKnown RBP9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 OXER1Q8TDS5 423 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 PAGE5Q96GU1 130 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 CLIC6Q96NY7 704 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 TRIM34Q9BYJ4 488 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 MAF1Q9H063 256 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 TTC12Q9H892 705 aaPredicted RBP9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 STK17AQ9UEE5 414 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 SERTAD1Q9UHV2 236 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 RWDD2AQ9UIY3 292 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 HDAC9Q9UKV0 1011 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 PCDHA6Q9UN73 950 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 PCDHA8Q9Y5H6 950 aa9.86□□□□□ -0.83
SNRNP40-202ENST00000373720 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 BICDL2A1A5D9 508 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 SMCO2A6NFE2 343 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 AP5Z1O43299 807 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 STX10O60499 249 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 PPFIA3O75145 1194 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 KIF20AO95235 890 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 FGFR1OPO95684 399 aaKnown RBP9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 PDHBP11177 359 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 SKILP12757 684 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 ZNF18P17022 549 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 CDK11BP21127 795 aaKnown RBP9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 CRKP46108 304 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 USP11P51784 963 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 ZNF543Q08ER8 600 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 PSMD2Q13200 908 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 AP3B2Q13367 1082 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 PNOCQ13519 176 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 E2F4Q16254 413 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 ZNF658Q5TYW1 1059 aaPredicted RBP9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 SPECC1LQ69YQ0 1117 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 APOBEC3HQ6NTF7 200 aaKnown RBP9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 ARHGAP27Q6ZUM4 889 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 FAM114A1Q8IWE2 563 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 CCDC24Q8N4L8 307 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 SAMD3Q8N6K7 520 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 C4orf32Q8N8J7 132 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 GMCL1P1Q8NEA9 526 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 MYRIPQ8NFW9 859 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 MTMR8Q96EF0 704 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 CEP95Q96GE4 821 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 CALML4Q96GE6 196 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 GMCL1Q96IK5 515 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 SH2D4AQ9H788 454 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 RIC8AQ9NPQ8 531 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 DISC1Q9NRI5 854 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 TMOD2Q9NZR1 351 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 MAN1B1Q9UKM7 699 aa9.85□□□□□ -0.83
SNRNP40-202ENST00000373720 ABCB11O95342 1321 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 ITIH6Q6UXX5 1313 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 MYH1P12882 1939 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 PVALEFA0A1B0GWK0 134 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 VWA3AA6NCI4 1184 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 ZBTB5O15062 677 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 TBX3O15119 743 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 ARHGAP6O43182 974 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 NMT2O60551 498 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 PLA2G6O60733 806 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 OR52Z1P0C646 297 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 PTGS1P23219 599 aa9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 EEF1GP26641 437 aaKnown RBP9.84□□□□□ -0.83
SNRNP40-202ENST00000373720 ADCY7P51828 1080 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms