RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 APOBRQ0VD83 1088 aa21.32■■□□□ 1
PBX3-202ENST00000373482 PKN2Q16513 984 aaKnown RBP21.32■■□□□ 1
PBX3-202ENST00000373482 CCDC174Q6PII3 467 aa21.32■■□□□ 1
PBX3-202ENST00000373482 PLEKHH3Q7Z736 793 aa21.32■■□□□ 1
PBX3-202ENST00000373482 ADGRF4Q8IZF3 695 aa21.32■■□□□ 1
PBX3-202ENST00000373482 PNMA2Q9UL42 364 aa21.32■■□□□ 1
PBX3-202ENST00000373482 ERCC3P19447 782 aa21.31■■□□□ 1
PBX3-202ENST00000373482 RXRAP19793 462 aa21.31■■□□□ 1
PBX3-202ENST00000373482 RBM25P49756 843 aaKnown RBP21.31■■□□□ 1
PBX3-202ENST00000373482 RCAN1P53805 252 aa21.31■■□□□ 1
PBX3-202ENST00000373482 SNAP25P60880 206 aa21.31■■□□□ 1
PBX3-202ENST00000373482 CAP1Q01518 475 aa21.31■■□□□ 1
PBX3-202ENST00000373482 GPR142Q7Z601 462 aa21.31■■□□□ 1
PBX3-202ENST00000373482 CCDC144CPQ8IYA2 1237 aa21.31■■□□□ 1
PBX3-202ENST00000373482 FANCBQ8NB91 859 aa21.31■■□□□ 1
PBX3-202ENST00000373482 LZTS2Q9BRK4 669 aa21.31■■□□□ 1
PBX3-202ENST00000373482 CPVLQ9H3G5 476 aa21.31■■□□□ 1
PBX3-202ENST00000373482 RBM28Q9NW13 759 aaKnown RBP21.31■■□□□ 1
PBX3-202ENST00000373482 SRRDQ9UH36 339 aa21.31■■□□□ 1
PBX3-202ENST00000373482 BRPF3Q9ULD4 1205 aa21.31■■□□□ 1
PBX3-202ENST00000373482 ICAM1P05362 532 aa21.3■■□□□ 1
PBX3-202ENST00000373482 TOB2Q14106 344 aaPredicted RBP21.3■■□□□ 1
PBX3-202ENST00000373482 RAB11FIP4Q86YS3 637 aa21.3■■□□□ 1
PBX3-202ENST00000373482 VAT1LQ9HCJ6 419 aa21.3■■□□□ 1
PBX3-202ENST00000373482 CCPG1Q9ULG6 757 aa21.3■■□□□ 1
PBX3-202ENST00000373482 MCM3APO60318 1980 aa21.29■■□□□ 1
PBX3-202ENST00000373482 GOLGA8AA7E2F4 631 aa21.29■■□□□ 1
PBX3-202ENST00000373482 GOLGA8BA8MQT2 603 aa21.29■■□□□ 1
PBX3-202ENST00000373482 STRNO43815 780 aa21.29■■□□□ 1
PBX3-202ENST00000373482 PPP2R5BQ15173 497 aa21.29■■□□□ 1
PBX3-202ENST00000373482 ANKRD1Q15327 319 aa21.29■■□□□ 1
PBX3-202ENST00000373482 CDC37Q16543 378 aaPredicted RBP21.29■■□□□ 1
PBX3-202ENST00000373482 RTN1Q16799 776 aa21.29■■□□□ 1
PBX3-202ENST00000373482 TKFCQ3LXA3 575 aa21.29■■□□□ 1
PBX3-202ENST00000373482 SOCS4Q8WXH5 440 aa21.29■■□□□ 1
PBX3-202ENST00000373482 AGBL1Q96MI9 1066 aa21.29■■□□□ 1
PBX3-202ENST00000373482 NUDT12Q9BQG2 462 aa21.29■■□□□ 1
PBX3-202ENST00000373482 ALDH8A1Q9H2A2 487 aaPredicted RBP21.29■■□□□ 1
PBX3-202ENST00000373482 JMJD4Q9H9V9 463 aa21.29■■□□□ 1
PBX3-202ENST00000373482 FBXO40Q9UH90 709 aa21.29■■□□□ 1
PBX3-202ENST00000373482 ZNF536O15090 1300 aa21.29■■□□□ 1
PBX3-202ENST00000373482 LCTP09848 1927 aa21.28■■□□□ 1
PBX3-202ENST00000373482 ALAS1P13196 640 aa21.28■■□□□ 1
PBX3-202ENST00000373482 SMARCA1P28370 1054 aa21.28■■□□□ 1
PBX3-202ENST00000373482 METAP2P50579 478 aaKnown RBP eCLIP21.28■■□□□ 1
PBX3-202ENST00000373482 NEK4P51957 841 aa21.28■■□□□ 1
PBX3-202ENST00000373482 CHST13Q8NET6 341 aa21.28■■□□□ 1
PBX3-202ENST00000373482 RAET1EQ8TD07 263 aa21.28■■□□□ 1
PBX3-202ENST00000373482 RIOX1Q9H6W3 641 aa21.28■■□□□ 1
PBX3-202ENST00000373482 PTPN22Q9Y2R2 807 aa21.28■■□□□ 1
PBX3-202ENST00000373482 CCDC196A0A1B0GTZ2 297 aa21.27■■□□□ 1
PBX3-202ENST00000373482 SLC15A5A6NIM6 579 aa21.27■■□□□ 1
PBX3-202ENST00000373482 FCER1AP12319 257 aa21.27■■□□□ 1
PBX3-202ENST00000373482 PTPREP23469 700 aa21.27■■□□□ 1
PBX3-202ENST00000373482 EVCP57679 992 aa21.27■■□□□ 1
PBX3-202ENST00000373482 PRKCZQ05513 592 aa21.27■■□□□ 1
PBX3-202ENST00000373482 FBXO46Q6PJ61 603 aaPredicted RBP21.27■■□□□ 1
PBX3-202ENST00000373482 SPZ1Q9BXG8 430 aa21.27■■□□□ 1
PBX3-202ENST00000373482 HOMER2Q9NSB8 354 aa21.27■■□□□ 1
PBX3-202ENST00000373482 GABRQQ9UN88 632 aa21.27■■□□□ 1
PBX3-202ENST00000373482 RIPK3Q9Y572 518 aa21.27■■□□□ 1
PBX3-202ENST00000373482 FLT3LGP49771 235 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 KCTD2Q14681 263 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 QRICH1Q2TAL8 776 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 COL13A1Q5TAT6 717 aaPredicted RBP21.26■□□□□ 0.99
PBX3-202ENST00000373482 HOMER1Q86YM7 354 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 ABRAQ8N0Z2 381 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 ZNF274Q96GC6 653 aaPredicted RBP21.26■□□□□ 0.99
PBX3-202ENST00000373482 TRERF1Q96PN7 1200 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 MMP19Q99542 508 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 ACAD9Q9H845 621 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 RNF146Q9NTX7 359 aa21.26■□□□□ 0.99
PBX3-202ENST00000373482 NID2Q14112 1375 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 ZBTB5O15062 677 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 PLEKHA8P1O95397 391 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 TRAF1Q13077 416 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 GRB14Q14449 540 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 TMTC3Q6ZXV5 915 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 NBPF11Q86T75 865 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 FBXO11Q86XK2 927 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 MTMR8Q96EF0 704 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 RRP36Q96EU6 259 aaKnown RBP21.25■□□□□ 0.99
PBX3-202ENST00000373482 TBC1D32Q96NH3 1257 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 AMNQ9BXJ7 453 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 SLC5A4Q9NY91 659 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 SEC63Q9UGP8 760 aaKnown RBP21.25■□□□□ 0.99
PBX3-202ENST00000373482 GJD2Q9UKL4 321 aa21.25■□□□□ 0.99
PBX3-202ENST00000373482 CYTH3O43739 400 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 PDIA3P30101 505 aaKnown RBP21.24■□□□□ 0.99
PBX3-202ENST00000373482 RGS2P41220 211 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 AK2P54819 239 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 MAP2K5Q13163 448 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 IRF5Q13568 498 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 USH1GQ495M9 461 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 MORN1Q5T089 497 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 DPP9Q86TI2 863 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 SRBD1Q8N5C6 995 aaKnown RBP21.24■□□□□ 0.99
PBX3-202ENST00000373482 PIGSQ96S52 555 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 MCOLN1Q9GZU1 580 aa21.24■□□□□ 0.99
PBX3-202ENST00000373482 PTCH2Q9Y6C5 1203 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms