RNA–Protein interactions for RNA: ENST00000372595.5

SCMH1-205, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SCMH1, Length 3,231 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-205ENST00000372595 DEF6Q9H4E7 631 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 MRPL44Q9H9J2 332 aaKnown RBP10.05□□□□□ -0.8
SCMH1-205ENST00000372595 ROBO1Q9Y6N7 1651 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 CHD4Q14839 1912 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 CNTNAP4Q9C0A0 1308 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 A0A0U1RQJ8 604 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 TRIM49BA6NDI0 452 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 KLRF2D3W0D1 207 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 TRAPPC10P48553 1259 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 GSTO1P78417 241 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 UBXN1Q04323 297 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 KRT31Q15323 416 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 ZNF569Q5MCW4 686 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 RAD9BQ6WBX8 426 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 DGKHQ86XP1 1220 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 ATRIPQ8WXE1 791 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 TMEM47Q9BQJ4 181 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 UBA5Q9GZZ9 404 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 TMEM60Q9H2L4 133 aa10.05□□□□□ -0.8
SCMH1-205ENST00000372595 ADD3Q9UEY8 706 aaKnown RBP10.05□□□□□ -0.8
SCMH1-205ENST00000372595 PUF60Q9UHX1 559 aaKnown RBP10.05□□□□□ -0.8
SCMH1-205ENST00000372595 RAD21O60216 631 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 KIF5CO60282 957 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 BTDP43251 543 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 EIF6P56537 245 aaKnown RBP10.04□□□□□ -0.8
SCMH1-205ENST00000372595 CORO7P57737 925 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 PPP2R3AQ06190 1150 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 GPS2Q13227 327 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 SMC1AQ14683 1233 aaKnown RBP10.04□□□□□ -0.8
SCMH1-205ENST00000372595 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 WWC2Q6AWC2 1192 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 USP17L2Q6R6M4 530 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 FAM43BQ6ZT52 329 aaPredicted RBP10.04□□□□□ -0.8
SCMH1-205ENST00000372595 TRIM47Q96LD4 638 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 EYA3Q99504 573 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 PARP3Q9Y6F1 533 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 CICQ96RK0 1608 aaPredicted RBP10.04□□□□□ -0.8
SCMH1-205ENST00000372595 BCL9LQ86UU0 1499 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 KCNJ18B7U540 433 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 FANCGO15287 622 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 PRCPP42785 496 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 FXR1P51114 621 aaKnown RBP eCLIP10.04□□□□□ -0.8
SCMH1-205ENST00000372595 COPB1P53618 953 aaKnown RBP10.04□□□□□ -0.8
SCMH1-205ENST00000372595 PICALMQ13492 652 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 KCNJ12Q14500 433 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 ACRBPQ8NEB7 543 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 CCDC148Q8NFR7 591 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 CEP89Q96ST8 783 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 RMND1Q9NWS8 449 aa10.04□□□□□ -0.8
SCMH1-205ENST00000372595 H3BQF6 201 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 RIMBP2O15034 1052 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 ATP8B1O43520 1251 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 CCNT1O60563 726 aaKnown RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 TM4SF1P30408 202 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 KRT9P35527 623 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 LMAN1P49257 510 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 ATP2B2Q01814 1243 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 GRAPQ13588 217 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 CCDC178Q5BJE1 867 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 GRAPLQ8TC17 118 aaPredicted RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 MTRQ99707 1265 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 SRRTQ9BXP5 876 aaKnown RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 TOM1O60784 492 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 RPS6KA5O75582 802 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 LONP1P36776 959 aaKnown RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 STIM1Q13586 685 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 PYM1Q9BRP8 204 aaKnown RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 TCP11L1Q9NUJ3 509 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 MAGEC2Q9UBF1 373 aaPredicted RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 LEMD3Q9Y2U8 911 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 CYTH3O43739 400 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 MFAP3LO75121 409 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 SPAG1Q07617 926 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 GRM4Q14833 912 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 RC3H1Q5TC82 1133 aaKnown RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 ZNF658Q5TYW1 1059 aaPredicted RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 MMS22LQ6ZRQ5 1243 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 CNGA4Q8IV77 575 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 BIN2Q9UBW5 565 aaPredicted RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 SEC63Q9UGP8 760 aaKnown RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 MAD2L2Q9UI95 211 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 USP21Q9UK80 565 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 PCDHA6Q9UN73 950 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 PCDHA8Q9Y5H6 950 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 ADGRG1Q9Y653 693 aa10.03□□□□□ -0.8
SCMH1-205ENST00000372595 DDX60Q8IY21 1712 aaKnown RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 COL16A1Q07092 1604 aaPredicted RBP10.03□□□□□ -0.8
SCMH1-205ENST00000372595 DUOX1Q9NRD9 1551 aa10.02□□□□□ -0.8
SCMH1-205ENST00000372595 TIAM2Q8IVF5 1701 aa10.02□□□□□ -0.8
SCMH1-205ENST00000372595 SMCO2A6NFE2 343 aa10.02□□□□□ -0.81
SCMH1-205ENST00000372595 ANKRD65E5RJM6 399 aa10.02□□□□□ -0.81
SCMH1-205ENST00000372595 UBAP1LF5GYI3 381 aa10.02□□□□□ -0.81
SCMH1-205ENST00000372595 PARP1P09874 1014 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms