RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 IFNL1Q8IU54 200 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 PDILTQ8N807 584 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 IDI2Q9BXS1 227 aa8.06□□□□□ -1.12
USP1-202ENST00000371146 CDR1P51861 262 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 FCGRTP55899 365 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 PPATQ06203 517 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 SYDE2Q5VT97 1194 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 BRMS1Q9HCU9 246 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 TLL2Q9Y6L7 1015 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 PRRC2BQ5JSZ5 2229 aaKnown RBP8.05□□□□□ -1.12
USP1-202ENST00000371146 GJA10Q969M2 543 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 TEPSINQ96N21 525 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 PTPN18Q99952 460 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 SPC25Q9HBM1 224 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 UBR3Q6ZT12 1888 aa8.05□□□□□ -1.12
USP1-202ENST00000371146 TCRBV5S4A2TA0A5A2 114 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 ZBBXA8MT70 800 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 MTFR1Q15390 333 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 MAP3K11Q16584 847 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 CCL14Q16627 93 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 GNASQ5JWF2 1037 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 C8orf76Q96K31 380 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 SENP6Q9GZR1 1112 aaPredicted RBP8.04□□□□□ -1.12
USP1-202ENST00000371146 EMILIN3Q9NT22 766 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 PRKAG2Q9UGJ0 569 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 PRR12Q9ULL5 1215 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 ATP11BQ9Y2G3 1177 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 NCOR1O75376 2440 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 CACNA1GO43497 2377 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 SPDYE5A6NIY4 337 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 RNF207Q6ZRF8 634 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 FANCBQ8NB91 859 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 RMDN3Q96TC7 470 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 GDPD2Q9HCC8 539 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 ZMYND8Q9ULU4 1186 aaPredicted RBP8.04□□□□□ -1.12
USP1-202ENST00000371146 POLR2AP24928 1970 aaKnown RBP8.04□□□□□ -1.12
USP1-202ENST00000371146 CASP8AP2Q9UKL3 1982 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 CCDC196A0A1B0GTZ2 297 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 SMCO2A6NFE2 343 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 FIBPO43427 364 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 MYL3P08590 195 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 QRICH1Q2TAL8 776 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 DSCC1Q9BVC3 393 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 PSTPIP2Q9H939 334 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 SUGCTQ9HAC7 445 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 TXNRD2Q9NNW7 524 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 GABRQQ9UN88 632 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 PTCH2Q9Y6C5 1203 aa8.04□□□□□ -1.12
USP1-202ENST00000371146 NFIBO00712 420 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 BEX3Q00994 111 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 PIK3AP1Q6ZUJ8 805 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 METTL13Q8N6R0 699 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 NEDD1Q8NHV4 660 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 USP26Q9BXU7 913 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 FAM49AQ9H0Q0 323 aaPredicted RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 RIPK3Q9Y572 518 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 GAKO14976 1311 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 MYPNQ86TC9 1320 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 COL1A1P02452 1464 aaPredicted RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 PQBP1O60828 265 aaKnown RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 KRT18P05783 430 aaKnown RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 ADORA2AP29274 412 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 MCM7P33993 719 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 IRX5P78411 483 aaPredicted RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 PRR16Q569H4 304 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 C15orf52Q6ZUT6 534 aaKnown RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 C16orf86Q6ZW13 317 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 FBXO16Q8IX29 292 aaPredicted RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 ADGRF4Q8IZF3 695 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 NKX2-3Q8TAU0 364 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 MAP4K1Q92918 833 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 PPP1R12CQ9BZL4 782 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 LSG1Q9H089 658 aaKnown RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 GZF1Q9H116 711 aaPredicted RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 SLC5A4Q9NY91 659 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 TNS1Q9HBL0 1735 aaKnown RBP8.03□□□□□ -1.12
USP1-202ENST00000371146 MYBP10242 640 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 ERVK-9P63128 1117 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 ERVK-24P63145 666 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 TRIM32Q13049 653 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 CHAMP1Q96JM3 812 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 TEX13BQ9BXU2 312 aa8.03□□□□□ -1.12
USP1-202ENST00000371146 C19orf81C9J6K1 198 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 ALDH1A1P00352 501 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 PRKAR2AP13861 404 aaKnown RBP8.02□□□□□ -1.13
USP1-202ENST00000371146 CYP4A11Q02928 519 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 PPIL2Q13356 520 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 ZNF174Q15697 407 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 SPECC1Q5M775 1068 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 AMNQ9BXJ7 453 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 MOV10L1Q9BXT6 1211 aaKnown RBP8.02□□□□□ -1.13
USP1-202ENST00000371146 SPATC1LQ9H0A9 340 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 AP5M1Q9H0R1 490 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 TMEM260Q9NX78 707 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 ZC3H4Q9UPT8 1303 aaKnown RBP8.02□□□□□ -1.13
USP1-202ENST00000371146 CTSHP09668 335 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 GRK4P32298 578 aa8.02□□□□□ -1.13
USP1-202ENST00000371146 MATR3P43243 847 aaKnown RBP eCLIP8.02□□□□□ -1.13
USP1-202ENST00000371146 TMEM62Q0P6H9 643 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms