RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 TMEM2Q9UHN6 1383 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 HSPD1P10809 573 aaKnown RBP9.41□□□□□ -0.9
ABCA4-201ENST00000370225 U2AF2P26368 475 aaKnown RBP eCLIP9.41□□□□□ -0.9
ABCA4-201ENST00000370225 ZNF827Q17R98 1081 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 ZBTB33Q86T24 672 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 ZNF577Q9BSK1 485 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 CACYBPQ9HB71 228 aaKnown RBP9.41□□□□□ -0.9
ABCA4-201ENST00000370225 M0R2C6 588 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 RPS6KA1Q15418 735 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 NEK8Q86SG6 692 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 AFAP1L2Q8N4X5 818 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 NRBP2Q9NSY0 501 aa9.41□□□□□ -0.9
ABCA4-201ENST00000370225 KDM2BQ8NHM5 1336 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 FANCBQ8NB91 859 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 PI4K2BQ8TCG2 481 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 IFIH1Q9BYX4 1025 aaKnown RBP9.4□□□□□ -0.9
ABCA4-201ENST00000370225 BZW2Q9Y6E2 419 aaKnown RBP9.4□□□□□ -0.9
ABCA4-201ENST00000370225 KCNJ18B7U540 433 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 FGAP02671 866 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 PDE6CP51160 858 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 KCNJ12Q14500 433 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 NXNQ6DKJ4 435 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 PALM2Q8IXS6 379 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 IFT20Q8IY31 132 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 KRT12Q99456 494 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 ABCF3Q9NUQ8 709 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.4□□□□□ -0.9
ABCA4-201ENST00000370225 EBAG9O00559 213 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 IVLP07476 585 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 LACTBP83111 547 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-201ENST00000370225 MORC3Q14149 939 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 NKX1-1Q15270 411 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-201ENST00000370225 LRCH2Q5VUJ6 765 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 SRGAP1Q7Z6B7 1085 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 GJA10Q969M2 543 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 SCYL1Q96KG9 808 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 FNDC3AQ9Y2H6 1198 aaKnown RBP9.4□□□□□ -0.9
ABCA4-201ENST00000370225 SCG2P13521 617 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 PARD3BQ8TEW8 1205 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 EAF2Q96CJ1 260 aaPredicted RBP9.4□□□□□ -0.9
ABCA4-201ENST00000370225 HINFPQ9BQA5 517 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 CARD6Q9BX69 1037 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 ZMYM6O95789 1325 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 AOX1Q06278 1338 aa9.4□□□□□ -0.9
ABCA4-201ENST00000370225 INO80B-WBP1J3KQ70 363 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 MEIS1O00470 390 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 OR52Z1P0C646 297 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 TTBK2Q6IQ55 1244 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 TTC30BQ8N4P2 665 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 INO80BQ9C086 356 aaPredicted RBP9.4□□□□□ -0.91
ABCA4-201ENST00000370225 TLR7Q9NYK1 1049 aaKnown RBP9.4□□□□□ -0.91
ABCA4-201ENST00000370225 C21orf2O43822 256 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 GUCY2FP51841 1108 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 SYCE1Q8N0S2 351 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 ANKRD42Q8N9B4 389 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 ARHGEF2Q92974 986 aaKnown RBP9.4□□□□□ -0.91
ABCA4-201ENST00000370225 RILPQ96NA2 401 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 IRAK4Q9NWZ3 460 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 HESX1Q9UBX0 185 aa9.4□□□□□ -0.91
ABCA4-201ENST00000370225 I3L4J1 428 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 PCCAP05165 728 aaPredicted RBP9.39□□□□□ -0.91
ABCA4-201ENST00000370225 ERCC6LQ2NKX8 1250 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 KIAA1841Q6NSI8 718 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 MICAL1Q8TDZ2 1067 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 ZNF653Q96CK0 615 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 PFKFB1P16118 471 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 STAT1P42224 750 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 POLR2FP61218 127 aaKnown RBP9.39□□□□□ -0.91
ABCA4-201ENST00000370225 CCNA1P78396 465 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 PHLDB2Q86SQ0 1253 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 RABGAP1Q9Y3P9 1069 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 CEP128Q6ZU80 1094 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 PCIF1Q9H4Z3 704 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 PCDHB4Q9Y5E5 795 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 MED23Q9ULK4 1368 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 ESYT2A0FGR8 921 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 ZNF75DP51815 510 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 PPP2R5BQ15173 497 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 CFAP43Q8NDM7 1665 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 CHMP6Q96FZ7 201 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 KCNK3O14649 394 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 HNRNPDLO14979 420 aaKnown RBP9.39□□□□□ -0.91
ABCA4-201ENST00000370225 BUB1BO60566 1050 aaPredicted RBP9.39□□□□□ -0.91
ABCA4-201ENST00000370225 FMNL1O95466 1100 aaPredicted RBP9.39□□□□□ -0.91
ABCA4-201ENST00000370225 MYL3P08590 195 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 NEDD9Q14511 834 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 SUPT20HL1Q3ZLR7 823 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 USP44Q9H0E7 712 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 AMFRQ9UKV5 643 aa9.39□□□□□ -0.91
ABCA4-201ENST00000370225 YEATS2Q9ULM3 1422 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 GNA14O95837 355 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 TAOK1Q7L7X3 1001 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 POLIQ9UNA4 740 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 BNIP3LO60238 219 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 ZSCAN20P17040 1043 aaPredicted RBP9.38□□□□□ -0.91
ABCA4-201ENST00000370225 CCND2P30279 289 aa9.38□□□□□ -0.91
ABCA4-201ENST00000370225 ADCY8P40145 1251 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms