RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 CPA1P15085 419 aa16■□□□□ 0.15
SSR4-202ENST00000370085 CCDC174Q6PII3 467 aa16■□□□□ 0.15
SSR4-202ENST00000370085 FBXO46Q6PJ61 603 aaPredicted RBP16■□□□□ 0.15
SSR4-202ENST00000370085 ADGRF4Q8IZF3 695 aa16■□□□□ 0.15
SSR4-202ENST00000370085 ABRAQ8N0Z2 381 aa16■□□□□ 0.15
SSR4-202ENST00000370085 FANCBQ8NB91 859 aa16■□□□□ 0.15
SSR4-202ENST00000370085 IL27Q8NEV9 243 aa16■□□□□ 0.15
SSR4-202ENST00000370085 UPF3BQ9BZI7 483 aaKnown RBP16■□□□□ 0.15
SSR4-202ENST00000370085 UBA5Q9GZZ9 404 aa16■□□□□ 0.15
SSR4-202ENST00000370085 PORCNQ9H237 461 aa16■□□□□ 0.15
SSR4-202ENST00000370085 GPHNQ9NQX3 736 aaPredicted RBP16■□□□□ 0.15
SSR4-202ENST00000370085 CCPG1Q9ULG6 757 aa16■□□□□ 0.15
SSR4-202ENST00000370085 MYH6P13533 1939 aa16■□□□□ 0.15
SSR4-202ENST00000370085 GOLGA8BA8MQT2 603 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 SMARCA1P28370 1054 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 RGS2P41220 211 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 KCTD2Q14681 263 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 RTN1Q16799 776 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 TRMT44Q8IYL2 757 aaKnown RBP15.99■□□□□ 0.15
SSR4-202ENST00000370085 STAG2Q8N3U4 1231 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 IL17RAQ96F46 866 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 MYL10Q9BUA6 226 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 AGXT2Q9BYV1 514 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 VAT1LQ9HCJ6 419 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 SEC63Q9UGP8 760 aaKnown RBP15.99■□□□□ 0.15
SSR4-202ENST00000370085 PTPN22Q9Y2R2 807 aa15.99■□□□□ 0.15
SSR4-202ENST00000370085 GOLGA8AA7E2F4 631 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 PEX10O60683 326 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 ALAS1P13196 640 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 PTPREP23469 700 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 METAP2P50579 478 aaKnown RBP eCLIP15.98■□□□□ 0.153e-6■■■■□ 21.8
SSR4-202ENST00000370085 PRKCZQ05513 592 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 APOBRQ0VD83 1088 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 CDC37Q16543 378 aaPredicted RBP15.98■□□□□ 0.15
SSR4-202ENST00000370085 NBPF11Q86T75 865 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 DOCK3Q8IZD9 2030 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 MMP19Q99542 508 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 SPZ1Q9BXG8 430 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 ACAD9Q9H845 621 aa15.98■□□□□ 0.15
SSR4-202ENST00000370085 PLXNB2O15031 1838 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 CTGFP29279 349 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 RBM25P49756 843 aaKnown RBP15.97■□□□□ 0.15
SSR4-202ENST00000370085 FLT3LGP49771 235 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 NEK4P51957 841 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 IRF5Q13568 498 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 COL9A3Q14050 684 aaPredicted RBP15.97■□□□□ 0.15
SSR4-202ENST00000370085 COL13A1Q5TAT6 717 aaPredicted RBP15.97■□□□□ 0.15
SSR4-202ENST00000370085 DPP9Q86TI2 863 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 FBXO11Q86XK2 927 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 CCDC144CPQ8IYA2 1237 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 ANKRD35Q8N283 1001 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 RRP36Q96EU6 259 aaKnown RBP15.97■□□□□ 0.15
SSR4-202ENST00000370085 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 AGBL1Q96MI9 1066 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 TRERF1Q96PN7 1200 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 BACH2Q9BYV9 841 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 MCOLN1Q9GZU1 580 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
SSR4-202ENST00000370085 RIOX1Q9H6W3 641 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 HOMER2Q9NSB8 354 aa15.97■□□□□ 0.15
SSR4-202ENST00000370085 PFASO15067 1338 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 ZSWIM8A7E2V4 1837 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 ZBTB5O15062 677 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 XRCC5P13010 732 aaKnown RBP15.96■□□□□ 0.15
SSR4-202ENST00000370085 RXRAP19793 462 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 SNAP25P60880 206 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 MAP2K5Q13163 448 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 GRB14Q14449 540 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 SLC9C1Q4G0N8 1177 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 CPLX2Q6PUV4 134 aaKnown RBP15.96■□□□□ 0.15
SSR4-202ENST00000370085 HOMER1Q86YM7 354 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 TNS4Q8IZW8 715 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 SLAIN1Q8ND83 568 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 ZNF274Q96GC6 653 aaPredicted RBP15.96■□□□□ 0.15
SSR4-202ENST00000370085 APBA2Q99767 749 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 AMNQ9BXJ7 453 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 JMJD4Q9H9V9 463 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 RNF146Q9NTX7 359 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 BIN2Q9UBW5 565 aaPredicted RBP15.96■□□□□ 0.15
SSR4-202ENST00000370085 BRPF3Q9ULD4 1205 aa15.96■□□□□ 0.15
SSR4-202ENST00000370085 ZNF536O15090 1300 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 ABCB11O95342 1321 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 BAZ2BQ9UIF8 2168 aaKnown RBP15.95■□□□□ 0.14
SSR4-202ENST00000370085 PNMA6FA0A0J9YX94 578 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 ADORA2AP29274 412 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 EVCP57679 992 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 QRICH1Q2TAL8 776 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 USH1GQ495M9 461 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 MORN1Q5T089 497 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 TMTC3Q6ZXV5 915 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 PXYLP1Q8TE99 480 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 MAF1Q9H063 256 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 CPVLQ9H3G5 476 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 RBM27Q9P2N5 1060 aaKnown RBP15.95■□□□□ 0.14
SSR4-202ENST00000370085 GJD2Q9UKL4 321 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 GABRQQ9UN88 632 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 MRPL11Q9Y3B7 192 aaKnown RBP15.95■□□□□ 0.14
SSR4-202ENST00000370085 PTCH2Q9Y6C5 1203 aa15.95■□□□□ 0.14
SSR4-202ENST00000370085 ZNF236Q9UL36 1845 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms