RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 PALD1Q9ULE6 856 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 MYO1BO43795 1136 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 ATP9BO43861 1147 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 SORBS3O60504 671 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 GPR37L1O60883 481 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 IL2RBP14784 551 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 ZKSCAN1P17029 563 aaPredicted RBP11.23□□□□□ -0.61
SCNM1-202ENST00000368905 PFKPQ01813 784 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 TKFCQ3LXA3 575 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 MCTP1Q6DN14 999 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 BRSK1Q8TDC3 778 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 THAP11Q96EK4 314 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 KAZALD1Q96I82 304 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 DHRS1Q96LJ7 313 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 SMYD2Q9NRG4 433 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 USP16Q9Y5T5 823 aa11.23□□□□□ -0.61
SCNM1-202ENST00000368905 AFDNP55196 1824 aaKnown RBP11.22□□□□□ -0.61
SCNM1-202ENST00000368905 TULP2O00295 520 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 NLRP12P59046 1061 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 CCDC178Q5BJE1 867 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 C10orf76Q5T2E6 689 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 GALNT17Q6IS24 598 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 BTN2A1Q7KYR7 527 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 LRP10Q7Z4F1 713 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 ZGPATQ8N5A5 531 aaKnown RBP11.22□□□□□ -0.61
SCNM1-202ENST00000368905 ATXN2LQ8WWM7 1075 aaKnown RBP11.22□□□□□ -0.61
SCNM1-202ENST00000368905 GJD4Q96KN9 370 aaPredicted RBP11.22□□□□□ -0.61
SCNM1-202ENST00000368905 MOGAT1Q96PD6 335 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 TM6SF1Q9BZW5 370 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 GRPEL1Q9HAV7 217 aa11.22□□□□□ -0.61
SCNM1-202ENST00000368905 BARX2Q9UMQ3 279 aaPredicted RBP11.22□□□□□ -0.61
SCNM1-202ENST00000368905 MORC2Q9Y6X9 1032 aaPredicted RBP11.22□□□□□ -0.61
SCNM1-202ENST00000368905 ESPNB1AK53 854 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 BHMG1C9JSJ3 638 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-202ENST00000368905 SASH1O94885 1247 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.61
SCNM1-202ENST00000368905 CNGA1P29973 690 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 CLDN10P78369 228 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 PKN1Q16512 942 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 KIF4BQ2VIQ3 1234 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 DALRD3Q5D0E6 543 aaKnown RBP11.21□□□□□ -0.61
SCNM1-202ENST00000368905 RNF20Q5VTR2 975 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 JAKMIP2Q96AA8 810 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 FAM212AQ96EL1 285 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 ASIC4Q96FT7 647 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 TRIM8Q9BZR9 551 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 SAGE1Q9NXZ1 904 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 EGFL7Q9UHF1 273 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-202ENST00000368905 SNX14Q9Y5W7 946 aa11.21□□□□□ -0.61
SCNM1-202ENST00000368905 COL5A2P05997 1499 aaPredicted RBP11.21□□□□□ -0.61
SCNM1-202ENST00000368905 WDR33Q9C0J8 1336 aaKnown RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 RASA4BC9J798 803 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 ICMTO60725 284 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 PRPF40AO75400 957 aaKnown RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 MBD3O95983 291 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 POU3F3P20264 500 aaPredicted RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 CTNNA1P35221 906 aaKnown RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 HTR3AP46098 478 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 RCAN1P53805 252 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 TPD52P55327 224 aaPredicted RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 GABREP78334 506 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 SRLQ86TD4 932 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 OR8H1Q8NGG4 311 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 EAF2Q96CJ1 260 aaPredicted RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 RSRC1Q96IZ7 334 aaKnown RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 ZSCAN31Q96LW9 406 aaPredicted RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 MRPL9Q9BYD2 267 aaKnown RBP11.21□□□□□ -0.62
SCNM1-202ENST00000368905 CYP4F11Q9HBI6 524 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 EPS15L1Q9UBC2 864 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 LIMCH1Q9UPQ0 1083 aa11.21□□□□□ -0.62
SCNM1-202ENST00000368905 RFX7Q2KHR2 1363 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 ARFGEF2Q9Y6D5 1785 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 SPATA31A6Q5VVP1 1343 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 A0A087WZG4 1122 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 RASA4O43374 803 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 SKAP2O75563 359 aaPredicted RBP11.2□□□□□ -0.62
SCNM1-202ENST00000368905 B3GALNT1O75752 331 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 HARSP12081 509 aaKnown RBP11.2□□□□□ -0.62
SCNM1-202ENST00000368905 PSMA5P28066 241 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 KCNJ4P48050 445 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 RENBPP51606 427 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 GRM1Q13255 1194 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 SF3B3Q15393 1217 aaKnown RBP11.2□□□□□ -0.62
SCNM1-202ENST00000368905 UPF3BQ9BZI7 483 aaKnown RBP11.2□□□□□ -0.62
SCNM1-202ENST00000368905 SH2B1Q9NRF2 756 aaPredicted RBP11.2□□□□□ -0.62
SCNM1-202ENST00000368905 ATG3Q9NT62 314 aa11.2□□□□□ -0.62
SCNM1-202ENST00000368905 KLRG2A4D1S0 409 aaPredicted RBP11.19□□□□□ -0.62
SCNM1-202ENST00000368905 K7ENM7 598 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 AP1G2O75843 785 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 KRT10P13645 584 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 ATF4P18848 351 aaPredicted RBP11.19□□□□□ -0.62
SCNM1-202ENST00000368905 GRK2P25098 689 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 SERPINB3P29508 390 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 PAPOLAP51003 745 aaKnown RBP11.19□□□□□ -0.62
SCNM1-202ENST00000368905 PLIN5Q00G26 463 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 TRAF1Q13077 416 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 UBE3BQ7Z3V4 1068 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
SCNM1-202ENST00000368905 DGKHQ86XP1 1220 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms