RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 BLIDQ8IZY5 108 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 RNF10Q8N5U6 811 aaKnown RBP19.93■□□□□ 0.78
SNX27-202ENST00000368841 RMDN2Q96LZ7 410 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 PCDHA12Q9UN75 941 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 POC1B-GALNT4F8VUJ3 575 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 OPHN1O60890 802 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 ARMCX5Q6P1M9 558 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 SUPT20HQ8NEM7 779 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 PCIF1Q9H4Z3 704 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 CCPG1Q9ULG6 757 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 POLR3AO14802 1390 aaPredicted RBP19.93■□□□□ 0.78
SNX27-202ENST00000368841 TMEM232C9JQI7 657 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 OSTNP61366 133 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 DYNLT1P63172 113 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 NEURL1BA8MQ27 555 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 ALDH1B1P30837 517 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 MUM1Q2TAK8 710 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 HP1BP3Q5SSJ5 553 aaPredicted RBP19.93■□□□□ 0.78
SNX27-202ENST00000368841 THAP12O43422 761 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 DMP1Q13316 513 aaPredicted RBP19.93■□□□□ 0.78
SNX27-202ENST00000368841 ZBTB33Q86T24 672 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 ATP2A3Q93084 1043 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 MRPL46Q9H2W6 279 aaKnown RBP19.93■□□□□ 0.78
SNX27-202ENST00000368841 SPC25Q9HBM1 224 aa19.93■□□□□ 0.78
SNX27-202ENST00000368841 VGLL3A8MV65 326 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 STAT1P42224 750 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 ANKRD13CQ8N6S4 541 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 GJA10Q969M2 543 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 ZNF496Q96IT1 587 aaPredicted RBP19.92■□□□□ 0.78
SNX27-202ENST00000368841 PARP2Q9UGN5 583 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 ADD1P35611 737 aaKnown RBP19.92■□□□□ 0.78
SNX27-202ENST00000368841 SLC16A2P36021 539 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 GNGT1P63211 74 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 ZBTB8OSQ8IWT0 167 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 IFNL3Q8IZI9 196 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 H7C0C1 242 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 ATP5OP48047 213 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 PLA2G4DQ86XP0 818 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 SMYD4Q8IYR2 804 aaPredicted RBP19.92■□□□□ 0.78
SNX27-202ENST00000368841 DCPSQ96C86 337 aaKnown RBP19.92■□□□□ 0.78
SNX27-202ENST00000368841 AS3MTQ9HBK9 375 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 C1orf112Q9NSG2 853 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 PCDHB4Q9Y5E5 795 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 EIF2AK4Q9P2K8 1649 aaKnown RBP19.92■□□□□ 0.78
SNX27-202ENST00000368841 SGK1O00141 431 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 HACE1Q8IYU2 909 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 SBNO1A3KN83 1393 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 MEIS1O00470 390 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 ZNF853P0CG23 659 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 GNL1P36915 607 aaPredicted RBP19.92■□□□□ 0.78
SNX27-202ENST00000368841 RUFY4Q6ZNE9 571 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 ARPP21Q9UBL0 812 aaPredicted RBP19.92■□□□□ 0.78
SNX27-202ENST00000368841 ZFYVE9O95405 1425 aa19.92■□□□□ 0.78
SNX27-202ENST00000368841 PARD3Q8TEW0 1356 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 GDF11O95390 407 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 SPDL1Q96EA4 605 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 VCXQ9H320 206 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 INPP5FQ9Y2H2 1132 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 PDZD8Q8NEN9 1154 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 SMIM24O75264 130 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 TUBB4BP68371 445 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 TSNAXIP1Q2TAA8 658 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 PI4K2BQ8TCG2 481 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 ADORA1P30542 326 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 GNPTABQ3T906 1256 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 SYMPKQ92797 1274 aaKnown RBP19.91■□□□□ 0.78
SNX27-202ENST00000368841 RASSF7Q02833 373 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 LRRC41Q15345 812 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 FBXO11Q86XK2 927 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 TEKT3Q9BXF9 490 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 NUCKS1Q9H1E3 243 aaKnown RBP19.91■□□□□ 0.78
SNX27-202ENST00000368841 OLA1Q9NTK5 396 aaKnown RBP19.91■□□□□ 0.78
SNX27-202ENST00000368841 KDM3AQ9Y4C1 1321 aa19.91■□□□□ 0.78
SNX27-202ENST00000368841 ZMYND10O75800 440 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 TMEM191BP0C7N4 346 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 MX2P20592 715 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 SAR1BQ9Y6B6 198 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 ENC1O14682 589 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 WHAMMQ8TF30 809 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 STK24Q9Y6E0 443 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 MMEL1Q495T6 779 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 FAM178BQ8IXR5 827 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 SERPINB6P35237 376 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 BRD3Q15059 726 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 NKX1-1Q15270 411 aaPredicted RBP19.9■□□□□ 0.78
SNX27-202ENST00000368841 HAUS2Q9NVX0 235 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 BNIP3LO60238 219 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 MAP7Q14244 749 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 RCN2Q14257 317 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 KCTD16Q68DU8 428 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 RAB17Q9H0T7 212 aa19.9■□□□□ 0.78
SNX27-202ENST00000368841 TRAPPC8Q9Y2L5 1435 aa19.89■□□□□ 0.78
SNX27-202ENST00000368841 MESDQ14696 234 aa19.89■□□□□ 0.78
SNX27-202ENST00000368841 RNF217Q8TC41 542 aa19.89■□□□□ 0.78
SNX27-202ENST00000368841 LZTS2Q9BRK4 669 aa19.89■□□□□ 0.78
SNX27-202ENST00000368841 KLRF2D3W0D1 207 aa19.89■□□□□ 0.77
SNX27-202ENST00000368841 ICA1Q05084 483 aa19.89■□□□□ 0.77
SNX27-202ENST00000368841 CHRNDQ07001 517 aa19.89■□□□□ 0.77
SNX27-202ENST00000368841 ALKBH8Q96BT7 664 aaKnown RBP19.89■□□□□ 0.77
SNX27-202ENST00000368841 TPCN1Q9ULQ1 816 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms