RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 NR1I3Q14994 352 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 TMC3Q7Z5M5 1100 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 SLCO6A1Q86UG4 719 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 EAF1Q96JC9 268 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 KIF2CQ99661 725 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 MRIQ9BWK5 157 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 KIAA1522Q9P206 1035 aaPredicted RBP5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 REV1Q9UBZ9 1251 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 AK5Q9Y6K8 562 aa5.87□□□□□ -1.47
ECHDC1-201ENST00000368287 ZNF20P17024 532 aa5.86□□□□□ -1.47
ECHDC1-201ENST00000368287 GJA9P57773 515 aa5.86□□□□□ -1.47
ECHDC1-201ENST00000368287 DAB2P98082 770 aa5.86□□□□□ -1.47
ECHDC1-201ENST00000368287 FOXO4P98177 505 aa5.86□□□□□ -1.47
ECHDC1-201ENST00000368287 SAPCD2Q86UD0 394 aa5.86□□□□□ -1.47
ECHDC1-201ENST00000368287 LOXL4Q96JB6 756 aa5.86□□□□□ -1.47
ECHDC1-201ENST00000368287 C8orf49Q96NF6 230 aa5.86□□□□□ -1.47
ECHDC1-201ENST00000368287 ACSL6Q9UKU0 697 aa5.86□□□□□ -1.47
ECHDC1-201ENST00000368287 A0A1W2PQ45 241 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 A0A1W2PQY0 241 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 SH3D21A4FU49 640 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 ENDOUP21128 410 aaKnown RBP5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 TMC4Q7Z404 712 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 ZNF526Q8TF50 670 aaPredicted RBP5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 FAM161BQ96MY7 647 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 C1QTNF3Q9BXJ4 246 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 KRTAP3-1Q9BYR8 98 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 LNPKQ9C0E8 428 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 PRDM14Q9GZV8 571 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 ERVK13-1Q9NX77 482 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 IMPACTQ9P2X3 320 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 TLR6Q9Y2C9 796 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 FAN1Q9Y2M0 1017 aa5.85□□□□□ -1.47
ECHDC1-201ENST00000368287 NOBOXO60393 691 aa5.84□□□□□ -1.47
ECHDC1-201ENST00000368287 SORBS3O60504 671 aa5.84□□□□□ -1.47
ECHDC1-201ENST00000368287 PRAMEF1O95521 474 aa5.84□□□□□ -1.47
ECHDC1-201ENST00000368287 RLBP1P12271 317 aa5.84□□□□□ -1.47
ECHDC1-201ENST00000368287 TACR2P21452 398 aa5.84□□□□□ -1.47
ECHDC1-201ENST00000368287 TTC9BQ8N6N2 239 aa5.84□□□□□ -1.47
ECHDC1-201ENST00000368287 RBM15Q96T37 977 aaKnown RBP eCLIP5.84□□□□□ -1.47
ECHDC1-201ENST00000368287 SLITRK6Q9H5Y7 841 aa5.84□□□□□ -1.47
ECHDC1-201ENST00000368287 SLPIP03973 132 aa5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 SNW1Q13573 536 aaKnown RBP5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 NBPF9Q3BBW0 867 aa5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 BNC2Q6ZN30 1099 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 CCDC84Q86UT8 332 aaPredicted RBP5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 CARFQ8N187 725 aa5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 SAMD11Q96NU1 681 aa5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 CDADC1Q9BWV3 514 aa5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 VTI1BQ9UEU0 232 aa5.83□□□□□ -1.48
ECHDC1-201ENST00000368287 PRR36Q9H6K5 1346 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 A0A1W2PQ27 194 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 A0A1W2PQ64 194 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 A0A1W2PQC6 194 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 A0A1W2PQD8 194 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 CYR61O00622 381 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 HTR3BO95264 441 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 HTRA3P83110 453 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 ZFPM1Q8IX07 1006 aa5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 MRRFQ96E11 262 aaKnown RBP5.82□□□□□ -1.48
ECHDC1-201ENST00000368287 RGS13O14921 159 aa5.81□□□□□ -1.48
ECHDC1-201ENST00000368287 SIGLEC6O43699 453 aa5.81□□□□□ -1.48
ECHDC1-201ENST00000368287 ATF2P15336 505 aa5.81□□□□□ -1.48
ECHDC1-201ENST00000368287 FBLN1P23142 703 aa5.81□□□□□ -1.48
ECHDC1-201ENST00000368287 CRB2Q5IJ48 1285 aa5.81□□□□□ -1.48
ECHDC1-201ENST00000368287 CHST13Q8NET6 341 aa5.81□□□□□ -1.48
ECHDC1-201ENST00000368287 JMJD8Q96S16 334 aa5.81□□□□□ -1.48
ECHDC1-201ENST00000368287 DNAJA2O60884 412 aa5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 DLX2Q07687 328 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 NBPF12Q5TAG4 269 aaPredicted RBP5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 PAQR3Q6TCH7 311 aa5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 RNF38Q9H0F5 515 aa5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 CHST7Q9NS84 486 aa5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 MINPP1Q9UNW1 487 aa5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 HCFC2Q9Y5Z7 792 aa5.8□□□□□ -1.48
ECHDC1-201ENST00000368287 FAM221AA4D161 298 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 MEIS1O00470 390 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 UBOX5O94941 541 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 CYBBP04839 570 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 DBHP09172 617 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 MVKQ03426 396 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 TAF1CQ15572 869 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 LDLRAD1Q5T700 205 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 USP51Q70EK9 711 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 Q8N1X5 172 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 PHC3Q8NDX5 983 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 SH3RF3Q8TEJ3 882 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 GATAD2BQ8WXI9 593 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 DVL3Q92997 716 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 PLA2G2DQ9UNK4 145 aa5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 POLR3KQ9Y2Y1 108 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-201ENST00000368287 A0A1W2PQJ5 194 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 E9PSI1 815 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 ZNF205O95201 554 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 RECKO95980 971 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 F13A1P00488 732 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 PLATP00750 562 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 RAG1P15918 1043 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 ACVRL1P37023 503 aa5.78□□□□□ -1.48
ECHDC1-201ENST00000368287 CEBPAP49715 358 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms