RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 OVOS2A0A0G2JMS6 1433 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 DIP2AQ14689 1571 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 CCDC25Q86WR0 208 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 CCDC155Q8N6L0 562 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 MARCH10Q8NA82 808 aaPredicted RBP13.65□□□□□ -0.22
PTPRK-203ENST00000368207 OR8K1Q8NGG5 319 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 SECISBP2LQ93073 1101 aaKnown RBP13.65□□□□□ -0.22
PTPRK-203ENST00000368207 MRFAP1L1Q96HT8 127 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 GPR162Q16538 588 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 STAG1Q8WVM7 1258 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 MASTLQ96GX5 879 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 PI4KBQ9UBF8 816 aa13.65□□□□□ -0.22
PTPRK-203ENST00000368207 TLDC2A0PJX2 215 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 TNNC1P63316 161 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 PABPC4Q13310 644 aaKnown RBP eCLIP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 CCDC91Q7Z6B0 441 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 SLFN12Q8IYM2 578 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 ANKRD35Q8N283 1001 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 SMIM23A6NLE4 172 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 FAM196BA6NMK8 535 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 TRPC3Q13507 836 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 DNAJC21Q5F1R6 531 aaKnown RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 FMNL3Q8IVF7 1028 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 KIF2CQ99661 725 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 DCP1AQ9NPI6 582 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 BMP3P12645 472 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 ELF2Q15723 593 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 XKR9Q5GH70 373 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 UTP14CQ5TAP6 766 aaKnown RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 SFMBT2Q5VUG0 894 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 SULF1Q8IWU6 871 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 FAM178BQ8IXR5 827 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 TSC1Q92574 1164 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 FAM84BQ96KN1 310 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 FERMT1Q9BQL6 677 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 IKBKGQ9Y6K9 419 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 IGSF3O75054 1194 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 FOSP01100 380 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 XRCC5P13010 732 aaKnown RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 UBE2SQ16763 222 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 FAM102BQ5T8I3 360 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 KIFAP3Q92845 792 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 GSDMAQ96QA5 445 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 DHX36Q9H2U1 1008 aaKnown RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 ARMCX3Q9UH62 379 aaPredicted RBP13.64□□□□□ -0.23
PTPRK-203ENST00000368207 NRXN1Q9ULB1 1477 aa13.64□□□□□ -0.23
PTPRK-203ENST00000368207 GSG1L2A8MUP6 293 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 CACNB1Q02641 598 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-203ENST00000368207 GNPTABQ3T906 1256 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 GADL1Q6ZQY3 521 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 DGKHQ86XP1 1220 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 TDRD7Q8NHU6 1098 aaKnown RBP13.63□□□□□ -0.23
PTPRK-203ENST00000368207 GJA10Q969M2 543 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 NOX5Q96PH1 765 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 LSM14BQ9BX40 385 aaKnown RBP13.63□□□□□ -0.23
PTPRK-203ENST00000368207 ZC3H13Q5T200 1668 aaKnown RBP13.63□□□□□ -0.23
PTPRK-203ENST00000368207 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 PDIA6Q15084 440 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 MCTP2Q6DN12 878 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 MB21D2Q8IYB1 491 aaPredicted RBP13.63□□□□□ -0.23
PTPRK-203ENST00000368207 STX10O60499 249 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 TTLL6Q8N841 843 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 IFIH1Q9BYX4 1025 aaKnown RBP13.63□□□□□ -0.23
PTPRK-203ENST00000368207 CTTNBP2NLQ9P2B4 639 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 SLFN14P0C7P3 912 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 CA8P35219 290 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 DNM2P50570 870 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 TXNRD1Q16881 649 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 STOX1Q6ZVD7 989 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 LRRC8AQ8IWT6 810 aa13.63□□□□□ -0.23
PTPRK-203ENST00000368207 SNAP25P60880 206 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 GOLGA8FQ08AF8 430 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 GOLGA8DPQ0D2H9 430 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 ENAHQ8N8S7 591 aaPredicted RBP13.62□□□□□ -0.23
PTPRK-203ENST00000368207 LARP4BQ92615 738 aaKnown RBP13.62□□□□□ -0.23
PTPRK-203ENST00000368207 TNNI1P19237 187 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 LRRC41Q15345 812 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 PPP1R7Q15435 360 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 LRCH2Q5VUJ6 765 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 MSANTD4Q8NCY6 345 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 TEKT3Q9BXF9 490 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 MLXIPQ9HAP2 919 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 TMTC3Q6ZXV5 915 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 ZNF354CQ86Y25 554 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 TDRD3Q9H7E2 651 aaKnown RBP13.62□□□□□ -0.23
PTPRK-203ENST00000368207 LARSQ9P2J5 1176 aaKnown RBP13.62□□□□□ -0.23
PTPRK-203ENST00000368207 MTUS1Q9ULD2 1270 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 PYCARDQ9ULZ3 195 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 CDC27P30260 824 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 TUBB4BP68371 445 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 ADAM9Q13443 819 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 CCDC114Q96M63 670 aa13.62□□□□□ -0.23
PTPRK-203ENST00000368207 CEMIPQ8WUJ3 1361 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 A0A1W2PRG0 241 aa13.61□□□□□ -0.23
PTPRK-203ENST00000368207 K7ENM7 598 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms