RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 OGNP20774 298 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 KRT71Q3SY84 523 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ARHGAP26Q9UNA1 814 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 HSPA1AP0DMV8 641 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 HSPA1BP0DMV9 641 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 NEK2P51955 445 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 DDX17Q92841 729 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 MTERF3Q96E29 417 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 MTHFSP49914 203 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 RARSP54136 660 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ARHGEF25Q86VW2 580 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 CFAP36Q96G28 342 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 XPO6Q96QU8 1125 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 F6X3S4 739 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 KIAA0391O15091 583 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 DDHD2O94830 711 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SEPT8Q92599 483 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TMEM60Q9H2L4 133 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 GNA11P29992 359 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 C6orf118Q5T5N4 469 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 PROM2Q8N271 834 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TMIEQ8NEW7 156 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 CMTM5Q96DZ9 223 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 METTL22Q9BUU2 404 aaPredicted RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ZNF644Q9H582 1327 aaPredicted RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 ZMYM2Q9UBW7 1377 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 SMARCA4P51532 1647 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 NOP2P46087 812 aaKnown RBP4.12□□□□□ -1.75
SYNE1-207ENST00000367255 LRRC2Q9BYS8 371 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 MYL6BP14649 208 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 CATSPER2Q96P56 530 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TRAPPC9Q96Q05 1148 aa4.12□□□□□ -1.75
SYNE1-207ENST00000367255 TSNARE1Q96NA8 513 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 NAPGQ99747 312 aaPredicted RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 PFASO15067 1338 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 C21orf2O43822 256 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 OCA2Q04671 838 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 EPS8Q12929 822 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 RIPK1Q13546 671 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 FAM173BQ6P4H8 233 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 UBE2R2Q712K3 238 aaPredicted RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 NLRP9Q7RTR0 991 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TP53INP1Q96A56 240 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 ZPR1O75312 459 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 GNL1P36915 607 aaPredicted RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 SNRPFP62306 86 aaKnown RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TERF2Q15554 542 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 MAGED4Q96JG8 741 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 OLFM1Q99784 485 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 SPG7Q9UQ90 795 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 PCDHB15Q9Y5E8 787 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TLR3O15455 904 aaKnown RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 PRLRP16471 622 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 RPS6KA3P51812 740 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 CEP70Q8NHQ1 597 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 SYN2Q92777 582 aaPredicted RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 FAM8A1Q9UBU6 413 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 POLR3DP05423 398 aaPredicted RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 RIBC1Q8N443 379 aaPredicted RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TIAM1Q13009 1591 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 GADD45BO75293 160 aaPredicted RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 NUP107P57740 925 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 SCFD1Q8WVM8 642 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TTC17Q96AE7 1141 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 FAM89AQ96GI7 184 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 C19orf44Q9H6X5 657 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 CTNNA1P35221 906 aaKnown RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 ZNF76P36508 570 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 LMAN1P49257 510 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 ESCO1Q5FWF5 840 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 DKC1O60832 514 aaKnown RBP eCLIP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 CLNS1AP54105 237 aaKnown RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TBC1D10BQ4KMP7 808 aaPredicted RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 SLC30A9Q6PML9 568 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 CARD10Q9BWT7 1032 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 ECHDC1Q9NTX5 307 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 SAMD9Q5K651 1589 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 GGPS1O95749 300 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 RFX8Q6ZV50 586 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TRIML2Q8N7C3 387 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 RRP15Q9Y3B9 282 aaKnown RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 ARHGEF40Q8TER5 1519 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 CNGA2Q16280 664 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 WDR17Q8IZU2 1322 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 ABCC2Q92887 1545 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 IKBIPQ70UQ0 350 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 GPR108Q9NPR9 543 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 RGL1Q9NZL6 768 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 KATNA1O75449 491 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 CAPZA2P47755 286 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TUBA1BP68363 451 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 TUBA1AQ71U36 451 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 RPLP2P05387 115 aaKnown RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 POLD1P28340 1107 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 CAPRIN1Q14444 709 aaKnown RBP4.11□□□□□ -1.75
SYNE1-207ENST00000367255 PPP1R14CQ8TAE6 165 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 ST14Q9Y5Y6 855 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 KBTBD12Q3ZCT8 623 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 FAM25AB3EWG3 89 aa4.11□□□□□ -1.75
SYNE1-207ENST00000367255 FAM25CB3EWG5 89 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms