RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SPDYE16A6NNV3 312 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 ATP2A1O14983 1001 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 MAP3K13O43283 966 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 MGEA5O60502 916 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 VAV2P52735 878 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 SPDYE2Q495Y8 402 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 SLC9C1Q4G0N8 1177 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 PRR16Q569H4 304 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 KANK3Q6NY19 840 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 PHLDB2Q86SQ0 1253 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 C8orf76Q96K31 380 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 TSC22D3Q99576 134 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 AMNQ9BXJ7 453 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 DRC3Q9H069 523 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 CCPG1Q9ULG6 757 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 MAP3K4Q9Y6R4 1608 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 BICDL2A1A5D9 508 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 CETPP11597 493 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 HARSP12081 509 aaKnown RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 HCLS1P14317 486 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 PPP1R21Q6ZMI0 780 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 TTC1Q99614 292 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 KIF9Q9HAQ2 790 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 RMND1Q9NWS8 449 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 FAM169AQ9Y6X4 670 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 PCP4L1A6NKN8 68 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 CCDC169A6NNP5 214 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 S100BP04271 92 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 SLC39A6Q13433 755 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 SNAPC2Q13487 334 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 KRT33BQ14525 404 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 RABGGTAQ92696 567 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 BAG1Q99933 345 aaPredicted RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 PANK2Q9BZ23 570 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 NUF2Q9BZD4 464 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 UNC45AQ9H3U1 944 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 SNRKQ9NRH2 765 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 FAN1Q9Y2M0 1017 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 ZNF233A6NK53 670 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 UBE2HP62256 183 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 AFAP1L1Q8TED9 768 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 KIFC2Q96AC6 838 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 SEC62Q99442 399 aaKnown RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 TBC1D2Q9BYX2 928 aa9.48□□□□□ -0.89
SYNE1-206ENST00000367253 IPO11Q9UI26 975 aaKnown RBP9.48□□□□□ -0.89
SYNE1-206ENST00000367253 LTKP29376 864 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 ZSCAN23Q3MJ62 389 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 LIN9Q5TKA1 542 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 EGFL6Q8IUX8 553 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 TSEN34Q9BSV6 310 aaKnown RBP9.47□□□□□ -0.89
SYNE1-206ENST00000367253 WDR64B1ANS9 1081 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 RAD17O75943 681 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 TBC1D8O95759 1140 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 PDZD4Q76G19 769 aaPredicted RBP9.47□□□□□ -0.89
SYNE1-206ENST00000367253 FAM9CQ8IZT9 166 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 LINS1Q8NG48 757 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 DENND3A2RUS2 1198 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 SMIM23A6NLE4 172 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 C21orf2O43822 256 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 CSPG5O95196 566 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 SLC9C2Q5TAH2 1124 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 USPL1Q5W0Q7 1092 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 EVI5LQ96CN4 794 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 ZC3H13Q5T200 1668 aaKnown RBP9.47□□□□□ -0.89
SYNE1-206ENST00000367253 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
SYNE1-206ENST00000367253 RNF40O75150 1001 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 STAG3L1P0CL83 205 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 VCAM1P19320 739 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 NR1H3Q13133 447 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 HELBQ8NG08 1087 aaPredicted RBP9.47□□□□□ -0.89
SYNE1-206ENST00000367253 NEK1Q96PY6 1258 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 MAK16Q9BXY0 300 aaKnown RBP9.47□□□□□ -0.89
SYNE1-206ENST00000367253 DONSONQ9NYP3 566 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 BAIAP2L1Q9UHR4 511 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 PRELID1Q9Y255 219 aa9.47□□□□□ -0.89
SYNE1-206ENST00000367253 A2ML1A8K2U0 1454 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 MROH5Q6ZUA9 1318 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 VWDEQ8N2E2 1590 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 SMAPO00193 183 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 ZMYND10O75800 440 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 DDHD2O94830 711 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 BRD1O95696 1058 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 DEFB115Q30KQ5 88 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.89
SYNE1-206ENST00000367253 RSRC2Q7L4I2 434 aaKnown RBP9.46□□□□□ -0.89
SYNE1-206ENST00000367253 GLT1D1Q96MS3 346 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 DHX36Q9H2U1 1008 aaKnown RBP9.46□□□□□ -0.89
SYNE1-206ENST00000367253 ADGRB3O60242 1522 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 N4BP3O15049 544 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 TRIM42Q8IWZ5 723 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 C7orf31Q8N865 590 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 PLBD2Q8NHP8 589 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 YIPF3Q9GZM5 350 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 NDEL1Q9GZM8 345 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 DYRK4Q9NR20 520 aa9.46□□□□□ -0.89
SYNE1-206ENST00000367253 ECHDC1Q9NTX5 307 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms