RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 SHISA4Q96DD7 197 aa10.91□□□□□ -0.66
MRPL55-216ENST00000366744 MAML3Q96JK9 1138 aa10.91□□□□□ -0.66
MRPL55-216ENST00000366744 IL25Q9H293 177 aa10.91□□□□□ -0.66
MRPL55-216ENST00000366744 GPCPD1Q9NPB8 672 aa10.91□□□□□ -0.66
MRPL55-216ENST00000366744 PRR12Q9ULL5 1215 aa10.91□□□□□ -0.66
MRPL55-216ENST00000366744 RBM8AQ9Y5S9 174 aaKnown RBP10.91□□□□□ -0.66
MRPL55-216ENST00000366744 TACC3Q9Y6A5 838 aa10.91□□□□□ -0.66
MRPL55-216ENST00000366744 IFIT3O14879 490 aaKnown RBP10.9□□□□□ -0.66
MRPL55-216ENST00000366744 ICAM1P05362 532 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 PGK2P07205 417 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 CYP21A2P08686 494 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 PARP1P09874 1014 aaKnown RBP10.9□□□□□ -0.66
MRPL55-216ENST00000366744 CCND3P30281 292 aaPredicted RBP10.9□□□□□ -0.66
MRPL55-216ENST00000366744 CYP2C19P33261 490 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 PTH1RQ03431 593 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 ZNF543Q08ER8 600 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 PRPF38BQ5VTL8 546 aaKnown RBP10.9□□□□□ -0.66
MRPL55-216ENST00000366744 RASGRP2Q7LDG7 609 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 NECAB2Q7Z6G3 386 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 NPLOC4Q8TAT6 608 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 MPHOSPH6Q99547 160 aaKnown RBP10.9□□□□□ -0.66
MRPL55-216ENST00000366744 ZSWIM5Q9P217 1185 aa10.9□□□□□ -0.66
MRPL55-216ENST00000366744 DIS3Q9Y2L1 958 aaKnown RBP10.9□□□□□ -0.66
MRPL55-216ENST00000366744 BAZ2BQ9UIF8 2168 aaKnown RBP10.89□□□□□ -0.67
MRPL55-216ENST00000366744 E7EWF7 191 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 SLC16A2P36021 539 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 WTAPQ15007 396 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 MSL3Q8N5Y2 521 aaKnown RBP10.89□□□□□ -0.67
MRPL55-216ENST00000366744 DPF3Q92784 378 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 MAP4K1Q92918 833 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 TINF2Q9BSI4 451 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 CRISPLD2Q9H0B8 497 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 PPP4R2Q9NY27 417 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 FLRT1Q9NZU1 646 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 DDX20Q9UHI6 824 aaKnown RBP10.89□□□□□ -0.67
MRPL55-216ENST00000366744 NRBP1Q9UHY1 535 aa10.89□□□□□ -0.67
MRPL55-216ENST00000366744 WDR19Q8NEZ3 1342 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 SYNGAP1Q96PV0 1343 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 KBTBD13C9JR72 458 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 COBLO75128 1261 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 MYCNP04198 464 aaPredicted RBP10.88□□□□□ -0.67
MRPL55-216ENST00000366744 CYBAP13498 195 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 MCM5P33992 734 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 TMEM67Q5HYA8 995 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 BTNL9Q6UXG8 535 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 NSMFQ6X4W1 530 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 CATIPQ7Z7H3 387 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 ZNF467Q7Z7K2 595 aaPredicted RBP10.88□□□□□ -0.67
MRPL55-216ENST00000366744 AGBL1Q96MI9 1066 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 RANBP17Q9H2T7 1088 aaKnown RBP10.88□□□□□ -0.67
MRPL55-216ENST00000366744 RIPK3Q9Y572 518 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 KIAA1217Q5T5P2 1943 aa10.88□□□□□ -0.67
MRPL55-216ENST00000366744 SEPT4O43236 478 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 REC8O95072 547 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 GOLGA8HP0CJ92 632 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 SNHG28P0DPA3 235 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 RARBP10826 455 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 AKR1A1P14550 325 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 SNAP25P60880 206 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 TRAF1Q13077 416 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 CDC37Q16543 378 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-216ENST00000366744 ZNF792Q3KQV3 632 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 TTBK2Q6IQ55 1244 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 NFXL1Q6ZNB6 911 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
MRPL55-216ENST00000366744 SKAP1Q86WV1 359 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 ARRDC4Q8NCT1 418 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 ANKS1AQ92625 1134 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 LSG1Q9H089 658 aaKnown RBP10.87□□□□□ -0.67
MRPL55-216ENST00000366744 C11orf49Q9H6J7 331 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 A1CFQ9NQ94 594 aaKnown RBP10.87□□□□□ -0.67
MRPL55-216ENST00000366744 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
MRPL55-216ENST00000366744 ZHX1Q9UKY1 873 aaPredicted RBP10.87□□□□□ -0.67
MRPL55-216ENST00000366744 OGDHLQ9ULD0 1010 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 NR2E3Q9Y5X4 410 aa10.87□□□□□ -0.67
MRPL55-216ENST00000366744 ZNF536O15090 1300 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 PTPDC1A2A3K4 754 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 CCDC69A6NI79 296 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 ASB14A6NK59 587 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 B4DLN1 442 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 PRC1O43663 620 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 EVI5O60447 810 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 KIF5BP33176 963 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 MRPL12P52815 198 aaKnown RBP10.86□□□□□ -0.67
MRPL55-216ENST00000366744 KRT32Q14532 448 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 USH1GQ495M9 461 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 CREB3L3Q68CJ9 461 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 CYB5R4Q7L1T6 521 aa10.86□□□□□ -0.67
MRPL55-216ENST00000366744 CTCFLQ8NI51 663 aaPredicted RBP10.86□□□□□ -0.67
MRPL55-216ENST00000366744 PAWRQ96IZ0 340 aaKnown RBP10.86□□□□□ -0.67
MRPL55-216ENST00000366744 ABCB11O95342 1321 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 DNAJC25-GNG10A0A024R161 153 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 KLRF2D3W0D1 207 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 DNM1LO00429 736 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 SLC27A2O14975 620 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 DDAH1O94760 285 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 FGD1P98174 961 aa10.85□□□□□ -0.67
MRPL55-216ENST00000366744 SEC23AQ15436 765 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms