RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 CNPY2Q9Y2B0 182 aa27.82■■■□□ 2.04
SHC1-201ENST00000366442 ZNF865P0CJ78 1059 aaPredicted RBP27.81■■■□□ 2.04
SHC1-201ENST00000366442 IMMTQ16891 758 aaKnown RBP27.81■■■□□ 2.04
SHC1-201ENST00000366442 LRRC26Q2I0M4 334 aa27.81■■■□□ 2.04
SHC1-201ENST00000366442 AGBL1Q96MI9 1066 aa27.81■■■□□ 2.04
SHC1-201ENST00000366442 SENP6Q9GZR1 1112 aaPredicted RBP27.81■■■□□ 2.04
SHC1-201ENST00000366442 MTMR7Q9Y216 660 aa27.81■■■□□ 2.04
SHC1-201ENST00000366442 RAD50Q92878 1312 aa27.81■■■□□ 2.04
SHC1-201ENST00000366442 SMCHD1A6NHR9 2005 aa27.8■■■□□ 2.04
SHC1-201ENST00000366442 ANO1Q5XXA6 986 aa27.8■■■□□ 2.04
SHC1-201ENST00000366442 HOMER2Q9NSB8 354 aa27.8■■■□□ 2.04
SHC1-201ENST00000366442 RNF146Q9NTX7 359 aa27.8■■■□□ 2.04
SHC1-201ENST00000366442 KBTBD13C9JR72 458 aa27.79■■■□□ 2.04
SHC1-201ENST00000366442 RARBP10826 455 aa27.79■■■□□ 2.04
SHC1-201ENST00000366442 PDHBP11177 359 aa27.79■■■□□ 2.04
SHC1-201ENST00000366442 TAL1P17542 331 aaPredicted RBP27.79■■■□□ 2.04
SHC1-201ENST00000366442 CCDC178Q5BJE1 867 aa27.79■■■□□ 2.04
SHC1-201ENST00000366442 GJC2Q5T442 439 aaPredicted RBP27.79■■■□□ 2.04
SHC1-201ENST00000366442 DGKHQ86XP1 1220 aa27.79■■■□□ 2.04
SHC1-201ENST00000366442 IL25Q9H293 177 aa27.79■■■□□ 2.04
SHC1-201ENST00000366442 RANBP17Q9H2T7 1088 aaKnown RBP27.79■■■□□ 2.04
SHC1-201ENST00000366442 SNAI1O95863 264 aaPredicted RBP27.78■■■□□ 2.04
SHC1-201ENST00000366442 SNHG28P0DPA3 235 aa27.78■■■□□ 2.04
SHC1-201ENST00000366442 AKR1A1P14550 325 aa27.78■■■□□ 2.04
SHC1-201ENST00000366442 FXR1P51114 621 aaKnown RBP eCLIP27.78■■■□□ 2.04
SHC1-201ENST00000366442 CCDC174Q6PII3 467 aa27.78■■■□□ 2.04
SHC1-201ENST00000366442 IQCA1Q86XH1 822 aa27.78■■■□□ 2.04
SHC1-201ENST00000366442 FGD4Q96M96 766 aa27.78■■■□□ 2.04
SHC1-201ENST00000366442 TRERF1Q96PN7 1200 aa27.78■■■□□ 2.04
SHC1-201ENST00000366442 A0A1W2PPC1 479 aa27.77■■■□□ 2.04
SHC1-201ENST00000366442 ICAM1P05362 532 aa27.77■■■□□ 2.04
SHC1-201ENST00000366442 LRRC41Q15345 812 aa27.77■■■□□ 2.04
SHC1-201ENST00000366442 SYDE2Q5VT97 1194 aa27.77■■■□□ 2.04
SHC1-201ENST00000366442 TTBK2Q6IQ55 1244 aa27.77■■■□□ 2.04
SHC1-201ENST00000366442 RUFY2Q8WXA3 655 aa27.77■■■□□ 2.04
SHC1-201ENST00000366442 A1CFQ9NQ94 594 aaKnown RBP27.77■■■□□ 2.04
SHC1-201ENST00000366442 XPNPEP3Q9NQH7 507 aa27.77■■■□□ 2.04
SHC1-201ENST00000366442 ZMYND8Q9ULU4 1186 aaPredicted RBP27.77■■■□□ 2.04
SHC1-201ENST00000366442 KDM4AO75164 1064 aa27.76■■■□□ 2.03
SHC1-201ENST00000366442 ALAS1P13196 640 aa27.76■■■□□ 2.03
SHC1-201ENST00000366442 ZNF543Q08ER8 600 aa27.76■■■□□ 2.03
SHC1-201ENST00000366442 FAM133AQ8N9E0 248 aa27.76■■■□□ 2.03
SHC1-201ENST00000366442 CCPG1Q9ULG6 757 aa27.76■■■□□ 2.03
SHC1-201ENST00000366442 FRMPD2Q68DX3 1309 aaPredicted RBP27.75■■■□□ 2.03
SHC1-201ENST00000366442 POTEB2H3BUK9 544 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 CHMLP26374 656 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 SLC16A2P36021 539 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 SNAP25P60880 206 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 ANKS1AQ92625 1134 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 GDF15Q99988 308 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 ZKSCAN3Q9BRR0 538 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 KRT23Q9C075 422 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 ABHD16BQ9H3Z7 469 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 CNNM2Q9H8M5 875 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.75■■■□□ 2.03
SHC1-201ENST00000366442 FAM184BQ9ULE4 1060 aa27.75■■■□□ 2.03
SHC1-201ENST00000366442 B4E1Z4 1266 aa27.74■■■□□ 2.03
SHC1-201ENST00000366442 BMP8BP34820 402 aa27.74■■■□□ 2.03
SHC1-201ENST00000366442 GPCPD1Q9NPB8 672 aa27.74■■■□□ 2.03
SHC1-201ENST00000366442 PNMA2Q9UL42 364 aa27.74■■■□□ 2.03
SHC1-201ENST00000366442 ACVR2BQ13705 512 aa27.73■■■□□ 2.03
SHC1-201ENST00000366442 GPATCH4Q5T3I0 446 aaKnown RBP27.73■■■□□ 2.03
SHC1-201ENST00000366442 ARMCX2Q7L311 632 aa27.73■■■□□ 2.03
SHC1-201ENST00000366442 RNF180Q86T96 592 aa27.73■■■□□ 2.03
SHC1-201ENST00000366442 ZSCAN10Q96SZ4 725 aaPredicted RBP27.73■■■□□ 2.03
SHC1-201ENST00000366442 ZSWIM5Q9P217 1185 aa27.73■■■□□ 2.03
SHC1-201ENST00000366442 ZHX1Q9UKY1 873 aaPredicted RBP27.73■■■□□ 2.03
SHC1-201ENST00000366442 MCM3APO60318 1980 aa27.72■■■□□ 2.03
SHC1-201ENST00000366442 MYCNP04198 464 aaPredicted RBP27.72■■■□□ 2.03
SHC1-201ENST00000366442 SYN1P17600 705 aa27.72■■■□□ 2.03
SHC1-201ENST00000366442 ATN1P54259 1190 aaPredicted RBP27.72■■■□□ 2.03
SHC1-201ENST00000366442 CNTN2Q02246 1040 aa27.72■■■□□ 2.03
SHC1-201ENST00000366442 MUM1L1Q5H9M0 696 aa27.72■■■□□ 2.03
SHC1-201ENST00000366442 SLC39A5Q6ZMH5 540 aa27.72■■■□□ 2.03
SHC1-201ENST00000366442 CCDC144CPQ8IYA2 1237 aa27.72■■■□□ 2.03
SHC1-201ENST00000366442 CYP39A1Q9NYL5 469 aa27.72■■■□□ 2.03
SHC1-201ENST00000366442 PHF24Q9UPV7 400 aa27.72■■■□□ 2.03
SHC1-201ENST00000366442 ADCYAP1R1P41586 468 aa27.71■■■□□ 2.03
SHC1-201ENST00000366442 SNX17Q15036 470 aa27.71■■■□□ 2.03
SHC1-201ENST00000366442 C1orf53Q5VUE5 145 aa27.71■■■□□ 2.03
SHC1-201ENST00000366442 PNMA1Q8ND90 353 aa27.71■■■□□ 2.03
SHC1-201ENST00000366442 ASB14A6NK59 587 aa27.7■■■□□ 2.02
SHC1-201ENST00000366442 ADAMTS4O75173 837 aa27.7■■■□□ 2.02
SHC1-201ENST00000366442 PGK1P00558 417 aa27.7■■■□□ 2.02
SHC1-201ENST00000366442 MAGEA10P43363 369 aaPredicted RBP27.7■■■□□ 2.02
SHC1-201ENST00000366442 RTP1P59025 263 aa27.7■■■□□ 2.02
SHC1-201ENST00000366442 ENAHQ8N8S7 591 aaPredicted RBP27.7■■■□□ 2.02
SHC1-201ENST00000366442 KAT14Q9H8E8 782 aa27.7■■■□□ 2.02
SHC1-201ENST00000366442 TNKSO95271 1327 aa27.69■■■□□ 2.02
SHC1-201ENST00000366442 SOWAHBA6NEL2 793 aa27.69■■■□□ 2.02
SHC1-201ENST00000366442 DUSP11O75319 330 aaKnown RBP27.69■■■□□ 2.02
SHC1-201ENST00000366442 LENG1Q96BZ8 264 aaPredicted RBP27.69■■■□□ 2.02
SHC1-201ENST00000366442 TSEN34Q9BSV6 310 aaKnown RBP27.69■■■□□ 2.02
SHC1-201ENST00000366442 KATNBL1Q9H079 304 aa27.69■■■□□ 2.02
SHC1-201ENST00000366442 LAMA3Q16787 3333 aa27.69■■■□□ 2.02
SHC1-201ENST00000366442 WDR19Q8NEZ3 1342 aa27.68■■■□□ 2.02
SHC1-201ENST00000366442 SGSM2O43147 1006 aa27.68■■■□□ 2.02
SHC1-201ENST00000366442 CCDC144BQ3MJ40 725 aa27.68■■■□□ 2.02
SHC1-201ENST00000366442 UBAC1Q9BSL1 405 aa27.68■■■□□ 2.02
SHC1-201ENST00000366442 U3KPZ7 1027 aaPredicted RBP27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms