RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
TNFRSF1A-202ENST00000366159 CWC27Q6UX04 472 aaKnown RBP16.15■□□□□ 0.18
TNFRSF1A-202ENST00000366159 SLC39A5Q6ZMH5 540 aa16.15■□□□□ 0.18
TNFRSF1A-202ENST00000366159 DCAF4Q8WV16 495 aa16.15■□□□□ 0.18
TNFRSF1A-202ENST00000366159 TTC14Q96N46 770 aa16.15■□□□□ 0.18
TNFRSF1A-202ENST00000366159 CTDP1Q9Y5B0 961 aaPredicted RBP16.15■□□□□ 0.18
TNFRSF1A-202ENST00000366159 LAMA4Q16363 1823 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 HIP1O00291 1037 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 AKR1A1P14550 325 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 MAGEA10P43363 369 aaPredicted RBP16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 RRP12Q5JTH9 1297 aaKnown RBP16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ANKRD35Q8N283 1001 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 FAM133AQ8N9E0 248 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CHMP4CQ96CF2 233 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 DSCC1Q9BVC3 393 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 KATNBL1Q9H079 304 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 IL25Q9H293 177 aa16.14■□□□□ 0.17
TNFRSF1A-202ENST00000366159 NEDD4P46934 1319 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 KBTBD13C9JR72 458 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ADAMTS4O75173 837 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 SNHG28P0DPA3 235 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 RARBP10826 455 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 GSPT1P15170 499 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 SLC4A3P48751 1232 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 NT5C2P49902 561 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ATN1P54259 1190 aaPredicted RBP16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CNTN2Q02246 1040 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 TTBK2Q6IQ55 1244 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 RANBP17Q9H2T7 1088 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ACAD9Q9H845 621 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 A1CFQ9NQ94 594 aaKnown RBP16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 XPNPEP3Q9NQH7 507 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 TOMM22Q9NS69 142 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 PHF24Q9UPV7 400 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CNPY2Q9Y2B0 182 aa16.13■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ASTN1O14525 1302 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 LAMA2P24043 3122 aaKnown RBP16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ZNF213O14771 459 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 PDHBP11177 359 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ADCYAP1R1P41586 468 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 SNAP25P60880 206 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CCSAPQ6IQ19 270 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 TRERF1Q96PN7 1200 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 RNF41Q9H4P4 317 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 HOMER2Q9NSB8 354 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 DIAPH3Q9NSV4 1193 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 RNF146Q9NTX7 359 aa16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.12■□□□□ 0.17
TNFRSF1A-202ENST00000366159 SOWAHBA6NEL2 793 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 SOX1O00570 391 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ADCY6O43306 1168 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 PGK1P00558 417 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ICAM1P05362 532 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 RTP1P59025 263 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 IKQ13123 557 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ACVR2BQ13705 512 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 MUM1L1Q5H9M0 696 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 TTC22Q5TAA0 569 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ARMCX2Q7L311 632 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 DGKHQ86XP1 1220 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 KLHDC9Q8NEP7 349 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ANKS1AQ92625 1134 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ESR2Q92731 530 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 LENG1Q96BZ8 264 aaPredicted RBP16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ABHD16BQ9H3Z7 469 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
TNFRSF1A-202ENST00000366159 MCM3APO60318 1980 aa16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 LCTP09848 1927 aa16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 DUSP11O75319 330 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ALAS1P13196 640 aa16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 SLC16A2P36021 539 aa16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 IRX6P78412 446 aaPredicted RBP16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CCDC174Q6PII3 467 aa16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 RNF180Q86T96 592 aa16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CCDC144CPQ8IYA2 1237 aa16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 TSEN34Q9BSV6 310 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CYP39A1Q9NYL5 469 aa16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ISY1Q9ULR0 285 aaKnown RBP16.1■□□□□ 0.17
TNFRSF1A-202ENST00000366159 LTBP2Q14767 1821 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 SYNRGQ9UMZ2 1314 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 POTEB2H3BUK9 544 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CST5P28325 142 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 NKX3-2P78367 333 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ZNF543Q08ER8 600 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 CCDC96Q2M329 555 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 LRIT3Q3SXY7 679 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 SYDE2Q5VT97 1194 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 FERMT2Q96AC1 680 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 ZHX1Q9UKY1 873 aaPredicted RBP16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 MTMR7Q9Y216 660 aa16.09■□□□□ 0.17
TNFRSF1A-202ENST00000366159 FRMPD2Q68DX3 1309 aaPredicted RBP16.08■□□□□ 0.17
TNFRSF1A-202ENST00000366159 A0A1W2PQ45 241 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 A0A1W2PQY0 241 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 KDM4AO75164 1064 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 CCDC144BQ3MJ40 725 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TRIM60Q495X7 471 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 TDHQ8IZJ6 230 aa16.08■□□□□ 0.16
TNFRSF1A-202ENST00000366159 MORC4Q8TE76 937 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms