RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 OXR1Q8N573 874 aa3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 RNPC3Q96LT9 517 aaKnown RBP3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 KLHL25Q9H0H3 589 aa3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 ADAMTS10Q9H324 1103 aa3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 TRIT1Q9H3H1 467 aaKnown RBP3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 ZCCHC4Q9H5U6 513 aa3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 ZSWIM4Q9H7M6 989 aa3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 SP110Q9HB58 689 aa3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 CWC22Q9HCG8 908 aaKnown RBP3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 JAG2Q9Y219 1238 aa3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 SLC12A7Q9Y666 1083 aa3.71□□□□□ -1.82
RNU4-56P-201ENST00000364700 TEX51A0A1B0GUA7 166 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 TLDC2A0PJX2 215 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 FITM1A5D6W6 292 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 PDPK1O15530 556 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 FOXD2O60548 495 aaPredicted RBP3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 SQSTM1Q13501 440 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 MLECQ14165 292 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 SNX17Q15036 470 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 NFE2L2Q16236 605 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 SLC10A6Q3KNW5 377 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 TCERG1LQ5VWI1 586 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 DBX2Q6ZNG2 339 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 SPATC1Q76KD6 591 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 CREG2Q8IUH2 290 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 ST13P5Q8NFI4 369 aaPredicted RBP3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 RNF141Q8WVD5 230 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 KREMEN1Q96MU8 473 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 KCNC2Q96PR1 638 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 KRTAP17-1Q9BYP8 105 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 GPR62Q9BZJ7 368 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 MCOLN1Q9GZU1 580 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 DUSP15Q9H1R2 295 aaPredicted RBP3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 ST7Q9NRC1 585 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 ZMYM5Q9UJ78 669 aa3.7□□□□□ -1.82
RNU4-56P-201ENST00000364700 A0A0G2JLL6 359 aaPredicted RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 RFXAPO00287 272 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 ENPP3O14638 875 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 SUSD5O60279 629 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 DIAPH1O60610 1272 aaKnown RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 ZGLP1P0C6A0 271 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 BMP7P18075 431 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 TPP2P29144 1249 aaPredicted RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 TRHRP34981 398 aaPredicted RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 CYP4F3Q08477 520 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 NFIXQ14938 502 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 NCAPHQ15003 741 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 PPP2R5EQ16537 467 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 NBPF9Q3BBW0 867 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 ZNF385BQ569K4 471 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 TDRD10Q5VZ19 366 aaKnown RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 EGFLAMQ63HQ2 1017 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 LARP1BQ659C4 914 aaKnown RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 VHLLQ6RSH7 139 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 CDH24Q86UP0 819 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 TMEM151BQ8IW70 566 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 MARCH10Q8NA82 808 aaPredicted RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 XAGE3Q8WTP9 111 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 SMARCC1Q92922 1105 aaPredicted RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 HAUS7Q99871 368 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 ZNF552Q9H707 407 aaPredicted RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 GPATCH2Q9NW75 528 aa3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 CNOT6Q9ULM6 557 aaKnown RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 YBX2Q9Y2T7 364 aaKnown RBP3.69□□□□□ -1.82
RNU4-56P-201ENST00000364700 SHROOM4Q9ULL8 1493 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 MYOCOSA0A1B0GUC4 107 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 FAM86C2PA6NEL3 165 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 SMARCA5O60264 1052 aaPredicted RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 LRRN2O75325 713 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 CLEC3AO75596 197 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 EPHX1P07099 455 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 SYN1P17600 705 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 ZNF143P52747 638 aaPredicted RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 SLC7A5Q01650 507 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 CHRNEQ04844 493 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 EGR3Q06889 387 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 SNW1Q13573 536 aaKnown RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 TCEAL1Q15170 157 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 DCAF15Q66K64 600 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 TMEM132EQ6IEE7 984 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 KIAA1211LQ6NV74 962 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 TSPYL5Q86VY4 417 aaPredicted RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 SPPL2CQ8IUH8 684 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 PHACTR4Q8IZ21 702 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 FAM177A1Q8N128 213 aaPredicted RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 SYTL4Q96C24 671 aaPredicted RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 INTS4Q96HW7 963 aaKnown RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 ZNF512BQ96KM6 892 aaPredicted RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 MRGPRX3Q96LB0 322 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 DHRS1Q96LJ7 313 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 SRPK1Q96SB4 655 aaKnown RBP3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 DNAJC7Q99615 494 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 ASPNQ9BXN1 380 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 TRIM55Q9BYV6 548 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 C19orf44Q9H6X5 657 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 TMEM260Q9NX78 707 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 RTEL1Q9NZ71 1219 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 PRR13Q9NZ81 148 aa3.68□□□□□ -1.82
RNU4-56P-201ENST00000364700 APEX2Q9UBZ4 518 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms