RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 ACRBPQ8NEB7 543 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 XAGE2Q96GT9 111 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 UIMC1Q96RL1 719 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 TADA3O75528 432 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 RPN1P04843 607 aaKnown RBP14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 GSTA1P08263 222 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 GSTA2P09210 222 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 SLCO1A2P46721 670 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 SEPT2Q15019 361 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 JAG2Q9Y219 1238 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 LOC102724159A0A0B4J2E5 919 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 GPC4O75487 556 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 TRIM37O94972 964 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 CA8P35219 290 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 YWHAGP61981 247 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 BFSP1Q12934 665 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 PDCLQ13371 301 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 PWP2Q15269 919 aaKnown RBP14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 TMED2Q15363 201 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 GRAMD4Q6IC98 578 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 NT5C3AQ9H0P0 336 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 PCDHA5Q9Y5H7 936 aa14.65□□□□□ -0.06
CCDC144A-203ENST00000360495 PTH1RQ03431 593 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 ACTN3Q08043 901 aaPredicted RBP14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 TRIM42Q8IWZ5 723 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 TRIML2Q8N7C3 387 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 SOWAHDA6NJG2 315 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 GDAP1Q8TB36 358 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 EFHD1Q9BUP0 239 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 MAGI1Q96QZ7 1491 aaPredicted RBP14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 PGRMC1O00264 195 aaKnown RBP14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 EEF1B2P24534 225 aaKnown RBP14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 CXCR5P32302 372 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 RFC4P35249 363 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 CYP2J2P51589 502 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 ARMC2Q8NEN0 867 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 DENND2AQ9ULE3 1009 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 PACSIN2Q9UNF0 486 aaPredicted RBP14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 MSH2P43246 934 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 CCDC117Q8IWD4 279 aaPredicted RBP14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 NME8Q8N427 588 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 SETDB2Q96T68 719 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 NCAPGQ9BPX3 1015 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 ANKFY1Q9P2R3 1169 aa14.64□□□□□ -0.07
CCDC144A-203ENST00000360495 BRD2P25440 801 aaKnown RBP14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 KRT81Q14533 505 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 GNPTABQ3T906 1256 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 DYDC2Q96IM9 177 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 ZBBXA8MT70 800 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 GRAMD1BQ3KR37 738 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 GOLGA8QA0A0J9YX86 632 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 GOLGA8OA6NCC3 632 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 GOLGA8NF8WBI6 632 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 LMNAP02545 664 aaKnown RBP14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 EIF6P56537 245 aaKnown RBP14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 HADHQ16836 314 aaKnown RBP14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 KRT28Q7Z3Y7 464 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 CYTH2Q99418 400 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 SH3GL3Q99963 347 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 TUBGCP2Q9BSJ2 902 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 ANTXR1Q9H6X2 564 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 RNF14Q9UBS8 474 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 DMRT2Q9Y5R5 561 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 ERBB4Q15303 1308 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 PDHA1P08559 390 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 ESRRAP11474 423 aaPredicted RBP14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 GPBP1Q86WP2 473 aa14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 CNOT6LQ96LI5 555 aaKnown RBP14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.63□□□□□ -0.07
CCDC144A-203ENST00000360495 NUP160Q12769 1436 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 GARSP41250 739 aaKnown RBP14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 SLFNL1Q499Z3 407 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 CC2D1AQ6P1N0 951 aaPredicted RBP14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 ELAC2Q9BQ52 826 aaKnown RBP14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 IRAK4Q9NWZ3 460 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 RTEL1Q9NZ71 1219 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 MAD1L1Q9Y6D9 718 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 PRAG1Q86YV5 1406 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 H0Y3Z8 333 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 SLC7A5Q01650 507 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 KAZNQ674X7 775 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 FNBP4Q8N3X1 1017 aaPredicted RBP14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 NEK9Q8TD19 979 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 PRPF31Q8WWY3 499 aaKnown RBP14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 DDX39AO00148 427 aaKnown RBP14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 COBLO75128 1261 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 CYP4F22Q6NT55 531 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 FAM167BQ9BTA0 163 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 SLC4A7Q9Y6M7 1214 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 KDM3AQ9Y4C1 1321 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 RASGRF2O14827 1237 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 TNNI1P19237 187 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 PDE6CP51160 858 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 EMBQ6PCB8 327 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 REXO1Q8N1G1 1221 aaKnown RBP14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 NSMCE1Q8WV22 266 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 CDKL2Q92772 493 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 NRBF2Q96F24 287 aa14.62□□□□□ -0.07
CCDC144A-203ENST00000360495 A0A087WWV3 80 aa14.61□□□□□ -0.07
CCDC144A-203ENST00000360495 SAT1P21673 171 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms