RNA–Protein interactions for RNA: ENST00000360218.2

CTSE-202, Transcript of cathepsin E, humanhuman

TSL 1 (best) BASIC

Gene CTSE, Length 2,071 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-202ENST00000360218 GPATCH4Q5T3I0 446 aaKnown RBP12.61□□□□□ -0.39
CTSE-202ENST00000360218 CCDC186Q7Z3E2 898 aa12.61□□□□□ -0.39
CTSE-202ENST00000360218 REXO1Q8N1G1 1221 aaKnown RBP12.61□□□□□ -0.39
CTSE-202ENST00000360218 ZNF713Q8N859 430 aaPredicted RBP12.61□□□□□ -0.39
CTSE-202ENST00000360218 MRFAP1L1Q96HT8 127 aa12.61□□□□□ -0.39
CTSE-202ENST00000360218 CSRNP1Q96S65 589 aa12.61□□□□□ -0.39
CTSE-202ENST00000360218 KANSL2Q9H9L4 492 aa12.61□□□□□ -0.39
CTSE-202ENST00000360218 NYAP2Q9P242 653 aa12.61□□□□□ -0.39
CTSE-202ENST00000360218 ZNF70Q9UC06 446 aaPredicted RBP12.61□□□□□ -0.39
CTSE-202ENST00000360218 PNMA6FA0A0J9YX94 578 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 IKBKBO14920 756 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 CDC25AP30304 524 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 LONP1P36776 959 aaKnown RBP12.6□□□□□ -0.39
CTSE-202ENST00000360218 ADCY7P51828 1080 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 DLGAP5Q15398 846 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 LETM2Q2VYF4 491 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 CCDC144BQ3MJ40 725 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 PPP4R3BQ5MIZ7 849 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 NIM1KQ8IY84 436 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 STAMQ92783 540 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 MKL1Q969V6 931 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 HSD3B7Q9H2F3 369 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 PIM2Q9P1W9 311 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 HDAC9Q9UKV0 1011 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 CNTNAP1P78357 1384 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 PP2D1A8MPX8 630 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 TPM3P06753 285 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
CTSE-202ENST00000360218 MYL5Q02045 173 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 SLFN13Q68D06 897 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 DTHD1Q6ZMT9 781 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 C17orf53Q8N3J3 647 aaPredicted RBP12.6□□□□□ -0.39
CTSE-202ENST00000360218 SPATA20Q8TB22 786 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 TMOD2Q9NZR1 351 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 ZNRF3Q9ULT6 936 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 PYCARDQ9ULZ3 195 aa12.6□□□□□ -0.39
CTSE-202ENST00000360218 CCNT1O60563 726 aaKnown RBP12.59□□□□□ -0.39
CTSE-202ENST00000360218 GH2P01242 217 aa12.59□□□□□ -0.39
CTSE-202ENST00000360218 TPM4P67936 248 aa12.59□□□□□ -0.39
CTSE-202ENST00000360218 UBE2SQ16763 222 aa12.59□□□□□ -0.39
CTSE-202ENST00000360218 PDXDC2PQ6P474 469 aa12.59□□□□□ -0.39
CTSE-202ENST00000360218 NEK8Q86SG6 692 aa12.59□□□□□ -0.39
CTSE-202ENST00000360218 DCAF4Q8WV16 495 aa12.59□□□□□ -0.39
CTSE-202ENST00000360218 MTMR8Q96EF0 704 aa12.59□□□□□ -0.39
CTSE-202ENST00000360218 MYH7BA7E2Y1 1941 aa12.59□□□□□ -0.39
CTSE-202ENST00000360218 ZBTB5O15062 677 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 SMC2O95347 1197 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 ATP1A3P13637 1013 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 SLC1A4P43007 532 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 TGFB2P61812 414 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 DPYDQ12882 1025 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 KARSQ15046 597 aaKnown RBP12.58□□□□□ -0.39
CTSE-202ENST00000360218 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 RBM26Q5T8P6 1007 aaKnown RBP12.58□□□□□ -0.39
CTSE-202ENST00000360218 PPP1R18Q6NYC8 613 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 OGFOD1Q8N543 542 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.39
CTSE-202ENST00000360218 VPS33BQ9H267 617 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.58□□□□□ -0.39
CTSE-202ENST00000360218 IFNKQ9P0W0 207 aa12.58□□□□□ -0.39
CTSE-202ENST00000360218 NEMFO60524 1076 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 OR52Z1P0C646 297 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 FMR1Q06787 632 aaKnown RBP eCLIP12.58□□□□□ -0.4
CTSE-202ENST00000360218 CXCL9Q07325 125 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 LRMPQ12912 555 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 DALRD3Q5D0E6 543 aaKnown RBP12.58□□□□□ -0.4
CTSE-202ENST00000360218 CDAN1Q8IWY9 1227 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 TRIML1Q8N9V2 468 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 IQUBQ8NA54 791 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 FAM151AQ8WW52 585 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 CCDC34Q96HJ3 373 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 XPO4Q9C0E2 1151 aaKnown RBP12.58□□□□□ -0.4
CTSE-202ENST00000360218 BLZF1Q9H2G9 400 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 VEZTQ9HBM0 779 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 RIC8AQ9NPQ8 531 aa12.58□□□□□ -0.4
CTSE-202ENST00000360218 SHTN1A0MZ66 631 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 LAD1O00515 517 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 POLD1P28340 1107 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 TXLNAP40222 546 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 PRPHP41219 470 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 QRICH1Q2TAL8 776 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 TRMT44Q8IYL2 757 aaKnown RBP12.57□□□□□ -0.4
CTSE-202ENST00000360218 MLKLQ8NB16 471 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 MTRQ99707 1265 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 PPP1R1BQ9UD71 204 aaPredicted RBP12.57□□□□□ -0.4
CTSE-202ENST00000360218 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 F5H6K3 240 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 EDIL3O43854 480 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 NDUFB10O96000 172 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 CLK2P49760 499 aaKnown RBP12.57□□□□□ -0.4
CTSE-202ENST00000360218 SNAP25P60880 206 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 FANCCQ00597 558 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 KLRC3Q07444 240 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 CUL4BQ13620 913 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 ARID5BQ14865 1188 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 CDC37Q16543 378 aaPredicted RBP12.57□□□□□ -0.4
CTSE-202ENST00000360218 AGBL3Q8NEM8 1001 aa12.57□□□□□ -0.4
CTSE-202ENST00000360218 MTFR1LQ9H019 292 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms