RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 VEZTQ9HBM0 779 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 MTMR7Q9Y216 660 aa23.07■■□□□ 1.28
CBWD3-201ENST00000360171 STAG2Q8N3U4 1231 aa23.06■■□□□ 1.28
CBWD3-201ENST00000360171 CNNM3Q8NE01 707 aa23.06■■□□□ 1.28
CBWD3-201ENST00000360171 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.06■■□□□ 1.28
CBWD3-201ENST00000360171 V9GYY5 206 aaPredicted RBP23.06■■□□□ 1.28
CBWD3-201ENST00000360171 hCG_1642624A0A1W2PR95 340 aa23.06■■□□□ 1.28
CBWD3-201ENST00000360171 PKN1Q16512 942 aa23.06■■□□□ 1.28
CBWD3-201ENST00000360171 FOXP4Q8IVH2 680 aaPredicted RBP23.06■■□□□ 1.28
CBWD3-201ENST00000360171 FAM151AQ8WW52 585 aa23.06■■□□□ 1.28
CBWD3-201ENST00000360171 DPF2Q92785 391 aa23.06■■□□□ 1.28
CBWD3-201ENST00000360171 CSRNP1Q96S65 589 aa23.06■■□□□ 1.28
CBWD3-201ENST00000360171 MAD2L2Q9UI95 211 aa23.06■■□□□ 1.28
CBWD3-201ENST00000360171 TOP1P11387 765 aaKnown RBP23.05■■□□□ 1.28
CBWD3-201ENST00000360171 MDM2Q00987 491 aaPredicted RBP23.05■■□□□ 1.28
CBWD3-201ENST00000360171 LONRF3Q496Y0 759 aa23.05■■□□□ 1.28
CBWD3-201ENST00000360171 NT5DC1Q5TFE4 455 aa23.05■■□□□ 1.28
CBWD3-201ENST00000360171 TATDN1Q6P1N9 297 aa23.05■■□□□ 1.28
CBWD3-201ENST00000360171 NOSTRINQ8IVI9 506 aa23.05■■□□□ 1.28
CBWD3-201ENST00000360171 PCDHA5Q9Y5H7 936 aa23.05■■□□□ 1.28
CBWD3-201ENST00000360171 ARHGAP6O43182 974 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 ZSCAN12O43309 604 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 KIF5BP33176 963 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 TRIM65Q6PJ69 517 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 HOMER1Q86YM7 354 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 MICALL2Q8IY33 904 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 SHISA4Q96DD7 197 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 CLIC6Q96NY7 704 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 SRCAPQ6ZRS2 3230 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 MPHOSPH10O00566 681 aaKnown RBP23.04■■□□□ 1.28
CBWD3-201ENST00000360171 PRPF3O43395 683 aaKnown RBP23.04■■□□□ 1.28
CBWD3-201ENST00000360171 ISM2Q6H9L7 571 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 CREBRFQ8IUR6 639 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 CDAN1Q8IWY9 1227 aa23.04■■□□□ 1.28
CBWD3-201ENST00000360171 V9GY48 417 aaPredicted RBP23.04■■□□□ 1.28
CBWD3-201ENST00000360171 GOLGA6L9A6NEM1 432 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 SLFN14P0C7P3 912 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 SLC35G1Q2M3R5 365 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 FKBP1CQ5VVH2 108 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 REXO1L1PQ8IX06 675 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 CCDC17Q96LX7 622 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 TRIM34Q9BYJ4 488 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 DACH1Q9UI36 760 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 MMP1P03956 469 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 LMNB1P20700 586 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 TBX2Q13207 712 aaPredicted RBP23.03■■□□□ 1.28
CBWD3-201ENST00000360171 BMS1Q14692 1282 aaKnown RBP23.03■■□□□ 1.28
CBWD3-201ENST00000360171 SAFBQ15424 915 aaKnown RBP eCLIP23.03■■□□□ 1.28
CBWD3-201ENST00000360171 ERCC6LQ2NKX8 1250 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 CERKLQ49MI3 558 aaPredicted RBP23.03■■□□□ 1.28
CBWD3-201ENST00000360171 RBM26Q5T8P6 1007 aaKnown RBP23.03■■□□□ 1.28
CBWD3-201ENST00000360171 LRRC47Q8N1G4 583 aaKnown RBP23.03■■□□□ 1.28
CBWD3-201ENST00000360171 TRIML1Q8N9V2 468 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 ZNF579Q8NAF0 562 aaKnown RBP23.03■■□□□ 1.28
CBWD3-201ENST00000360171 TMEM39BQ9GZU3 492 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 FOXP1Q9H334 677 aaPredicted RBP23.03■■□□□ 1.28
CBWD3-201ENST00000360171 FANCLQ9NW38 375 aa23.03■■□□□ 1.28
CBWD3-201ENST00000360171 PTPREP23469 700 aa23.02■■□□□ 1.28
CBWD3-201ENST00000360171 RILPL1Q5EBL4 403 aa23.02■■□□□ 1.28
CBWD3-201ENST00000360171 TMEM139Q8IV31 216 aa23.02■■□□□ 1.28
CBWD3-201ENST00000360171 MLKLQ8NB16 471 aa23.02■■□□□ 1.28
CBWD3-201ENST00000360171 CNOT7Q9UIV1 285 aaKnown RBP23.02■■□□□ 1.28
CBWD3-201ENST00000360171 KCNJ14Q9UNX9 436 aa23.02■■□□□ 1.28
CBWD3-201ENST00000360171 PALM3A6NDB9 673 aaPredicted RBP23.01■■□□□ 1.27
CBWD3-201ENST00000360171 YBX3P16989 372 aaKnown RBP eCLIP23.01■■□□□ 1.27
CBWD3-201ENST00000360171 AKAP17AQ02040 695 aaKnown RBP23.01■■□□□ 1.27
CBWD3-201ENST00000360171 RRP1BQ14684 758 aaKnown RBP23.01■■□□□ 1.27
CBWD3-201ENST00000360171 SAMD7Q7Z3H4 446 aa23.01■■□□□ 1.27
CBWD3-201ENST00000360171 SCAF8Q9UPN6 1271 aaKnown RBP23.01■■□□□ 1.27
CBWD3-201ENST00000360171 GDF11O95390 407 aa23.01■■□□□ 1.27
CBWD3-201ENST00000360171 TTLL1O95922 423 aa23.01■■□□□ 1.27
CBWD3-201ENST00000360171 GOLGA8HP0CJ92 632 aa23.01■■□□□ 1.27
CBWD3-201ENST00000360171 TERF2Q15554 542 aa23.01■■□□□ 1.27
CBWD3-201ENST00000360171 FAM83AQ86UY5 434 aa23.01■■□□□ 1.27
CBWD3-201ENST00000360171 ZNF446Q9NWS9 450 aa23.01■■□□□ 1.27
CBWD3-201ENST00000360171 DNAI1Q9UI46 699 aa23.01■■□□□ 1.27
CBWD3-201ENST00000360171 BMP6P22004 513 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 SARSP49591 514 aaKnown RBP23■■□□□ 1.27
CBWD3-201ENST00000360171 MMP14P50281 582 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 JAG1P78504 1218 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 TBC1D10BQ4KMP7 808 aaPredicted RBP23■■□□□ 1.27
CBWD3-201ENST00000360171 USP17L2Q6R6M4 530 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 ENOX1Q8TC92 643 aaKnown RBP23■■□□□ 1.27
CBWD3-201ENST00000360171 PGAP2Q9UHJ9 254 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 ASTN2O75129 1339 aaPredicted RBP23■■□□□ 1.27
CBWD3-201ENST00000360171 TPM1P09493 284 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 ZNF18P17022 549 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 POSTNQ15063 836 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 KANK3Q6NY19 840 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 INTS13Q9NVM9 706 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 VPS54Q9P1Q0 977 aa23■■□□□ 1.27
CBWD3-201ENST00000360171 FBXO2Q9UK22 296 aaPredicted RBP23■■□□□ 1.27
CBWD3-201ENST00000360171 USP17L5A8MUK1 530 aa22.99■■□□□ 1.27
CBWD3-201ENST00000360171 CYTH3O43739 400 aa22.99■■□□□ 1.27
CBWD3-201ENST00000360171 STX10O60499 249 aa22.99■■□□□ 1.27
CBWD3-201ENST00000360171 CT47A1Q5JQC4 288 aaPredicted RBP22.99■■□□□ 1.27
CBWD3-201ENST00000360171 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.99■■□□□ 1.27
CBWD3-201ENST00000360171 MAN1B1Q9UKM7 699 aa22.99■■□□□ 1.27
CBWD3-201ENST00000360171 PDHBP11177 359 aa22.99■■□□□ 1.27
CBWD3-201ENST00000360171 VEGFAP15692 232 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms