RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 TTF1Q15361 905 aaPredicted RBP8.38□□□□□ -1.07
APP-206ENST00000359726 UAP1Q16222 522 aaPredicted RBP8.38□□□□□ -1.07
APP-206ENST00000359726 KCTD16Q68DU8 428 aa8.38□□□□□ -1.07
APP-206ENST00000359726 USHBP1Q8N6Y0 703 aa8.38□□□□□ -1.07
APP-206ENST00000359726 NCOA7Q8NI08 942 aa8.38□□□□□ -1.07
APP-206ENST00000359726 ITFG2Q969R8 447 aa8.38□□□□□ -1.07
APP-206ENST00000359726 TMEM59LQ9UK28 342 aa8.38□□□□□ -1.07
APP-206ENST00000359726 ANGEL1Q9UNK9 670 aaKnown RBP8.38□□□□□ -1.07
APP-206ENST00000359726 BTBD18B2RXH4 712 aa8.38□□□□□ -1.07
APP-206ENST00000359726 SLC8A1P32418 973 aa8.38□□□□□ -1.07
APP-206ENST00000359726 RAB27AP51159 221 aa8.38□□□□□ -1.07
APP-206ENST00000359726 CDC37Q16543 378 aaPredicted RBP8.38□□□□□ -1.07
APP-206ENST00000359726 WASHC4Q2M389 1173 aa8.38□□□□□ -1.07
APP-206ENST00000359726 CCDC122Q5T0U0 273 aa8.38□□□□□ -1.07
APP-206ENST00000359726 TMED8Q6PL24 325 aaPredicted RBP8.38□□□□□ -1.07
APP-206ENST00000359726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.38□□□□□ -1.07
APP-206ENST00000359726 EHBP1Q8NDI1 1231 aa8.38□□□□□ -1.07
APP-206ENST00000359726 ARMC2Q8NEN0 867 aa8.38□□□□□ -1.07
APP-206ENST00000359726 CNKSR1Q969H4 720 aa8.38□□□□□ -1.07
APP-206ENST00000359726 OSBPL9Q96SU4 736 aa8.38□□□□□ -1.07
APP-206ENST00000359726 SH2D4AQ9H788 454 aa8.38□□□□□ -1.07
APP-206ENST00000359726 SLC5A4Q9NY91 659 aa8.38□□□□□ -1.07
APP-206ENST00000359726 CNOT8Q9UFF9 292 aaKnown RBP8.38□□□□□ -1.07
APP-206ENST00000359726 SALL4Q9UJQ4 1053 aa8.38□□□□□ -1.07
APP-206ENST00000359726 ABCC12Q96J65 1359 aa8.38□□□□□ -1.07
APP-206ENST00000359726 LGALS16A8MUM7 142 aa8.37□□□□□ -1.07
APP-206ENST00000359726 HMGB1P1B2RPK0 211 aaPredicted RBP8.37□□□□□ -1.07
APP-206ENST00000359726 KCNJ18B7U540 433 aa8.37□□□□□ -1.07
APP-206ENST00000359726 LINGO3P0C6S8 592 aa8.37□□□□□ -1.07
APP-206ENST00000359726 RDXP35241 583 aaKnown RBP8.37□□□□□ -1.07
APP-206ENST00000359726 KCNJ12Q14500 433 aa8.37□□□□□ -1.07
APP-206ENST00000359726 CCDC170Q8IYT3 715 aa8.37□□□□□ -1.07
APP-206ENST00000359726 TNFRSF25Q93038 417 aa8.37□□□□□ -1.07
APP-206ENST00000359726 EPSTI1Q96J88 318 aa8.37□□□□□ -1.07
APP-206ENST00000359726 HINFPQ9BQA5 517 aa8.37□□□□□ -1.07
APP-206ENST00000359726 PUS7LQ9H0K6 701 aaKnown RBP8.37□□□□□ -1.07
APP-206ENST00000359726 NOD2Q9HC29 1040 aa8.37□□□□□ -1.07
APP-206ENST00000359726 PLCB1Q9NQ66 1216 aa8.37□□□□□ -1.07
APP-206ENST00000359726 RBM12Q9NTZ6 932 aaKnown RBP8.37□□□□□ -1.07
APP-206ENST00000359726 CTNND2Q9UQB3 1225 aa8.37□□□□□ -1.07
APP-206ENST00000359726 C15orf41Q9Y2V0 281 aa8.37□□□□□ -1.07
APP-206ENST00000359726 WNK3Q9BYP7 1800 aa8.37□□□□□ -1.07
APP-206ENST00000359726 TMEM2Q9UHN6 1383 aa8.37□□□□□ -1.07
APP-206ENST00000359726 IFIT3O14879 490 aaKnown RBP8.37□□□□□ -1.07
APP-206ENST00000359726 PJA2O43164 708 aa8.37□□□□□ -1.07
APP-206ENST00000359726 COBLO75128 1261 aa8.37□□□□□ -1.07
APP-206ENST00000359726 DRD4P21917 467 aa8.37□□□□□ -1.07
APP-206ENST00000359726 ABL2P42684 1182 aa8.37□□□□□ -1.07
APP-206ENST00000359726 CARSP49589 748 aaKnown RBP8.37□□□□□ -1.07
APP-206ENST00000359726 CLNS1AP54105 237 aaKnown RBP8.37□□□□□ -1.07
APP-206ENST00000359726 EARS2Q5JPH6 523 aaKnown RBP8.37□□□□□ -1.07
APP-206ENST00000359726 P3H4Q92791 437 aa8.37□□□□□ -1.07
APP-206ENST00000359726 SEC16BQ96JE7 1060 aa8.37□□□□□ -1.07
APP-206ENST00000359726 SH3GL3Q99963 347 aa8.37□□□□□ -1.07
APP-206ENST00000359726 TLR10Q9BXR5 811 aa8.37□□□□□ -1.07
APP-206ENST00000359726 KIF9Q9HAQ2 790 aa8.37□□□□□ -1.07
APP-206ENST00000359726 TAB2Q9NYJ8 693 aa8.37□□□□□ -1.07
APP-206ENST00000359726 EHD2Q9NZN4 543 aa8.37□□□□□ -1.07
APP-206ENST00000359726 CORO1CQ9ULV4 474 aaPredicted RBP8.37□□□□□ -1.07
APP-206ENST00000359726 LRP5O75197 1615 aa8.37□□□□□ -1.07
APP-206ENST00000359726 A0A1B0GUA9 196 aa8.37□□□□□ -1.07
APP-206ENST00000359726 HSF2BPO75031 334 aa8.37□□□□□ -1.07
APP-206ENST00000359726 SRGNP10124 158 aa8.37□□□□□ -1.07
APP-206ENST00000359726 METAP2P50579 478 aaKnown RBP eCLIP8.37□□□□□ -1.07
APP-206ENST00000359726 VAV2P52735 878 aa8.37□□□□□ -1.07
APP-206ENST00000359726 HAND2P61296 217 aa8.37□□□□□ -1.07
APP-206ENST00000359726 ASTE1Q2TB18 679 aaPredicted RBP8.37□□□□□ -1.07
APP-206ENST00000359726 RILPL1Q5EBL4 403 aa8.37□□□□□ -1.07
APP-206ENST00000359726 CHADLQ6NUI6 762 aa8.37□□□□□ -1.07
APP-206ENST00000359726 LRIG3Q6UXM1 1119 aa8.37□□□□□ -1.07
APP-206ENST00000359726 EIF1ADQ8N9N8 165 aaKnown RBP8.37□□□□□ -1.07
APP-206ENST00000359726 PARD3BQ8TEW8 1205 aa8.37□□□□□ -1.07
APP-206ENST00000359726 CUL5Q93034 780 aa8.37□□□□□ -1.07
APP-206ENST00000359726 STAMBPL1Q96FJ0 436 aa8.37□□□□□ -1.07
APP-206ENST00000359726 NUP88Q99567 741 aaPredicted RBP8.37□□□□□ -1.07
APP-206ENST00000359726 NHEJ1Q9H9Q4 299 aaPredicted RBP8.37□□□□□ -1.07
APP-206ENST00000359726 LRRC4CQ9HCJ2 640 aa8.37□□□□□ -1.07
APP-206ENST00000359726 AGPAT5Q9NUQ2 364 aa8.37□□□□□ -1.07
APP-206ENST00000359726 SMARCAL1Q9NZC9 954 aa8.37□□□□□ -1.07
APP-206ENST00000359726 TRPC6Q9Y210 931 aa8.37□□□□□ -1.07
APP-206ENST00000359726 MYH3P11055 1940 aa8.36□□□□□ -1.07
APP-206ENST00000359726 A0A1W2PQJ5 194 aa8.36□□□□□ -1.07
APP-206ENST00000359726 GMNCA6NCL1 334 aa8.36□□□□□ -1.07
APP-206ENST00000359726 ZSCAN5CA6NGD5 496 aaPredicted RBP8.36□□□□□ -1.07
APP-206ENST00000359726 H0YHG0 523 aa8.36□□□□□ -1.07
APP-206ENST00000359726 IFNAR1P17181 557 aa8.36□□□□□ -1.07
APP-206ENST00000359726 PMS1P54277 932 aaKnown RBP8.36□□□□□ -1.07
APP-206ENST00000359726 SEMA3FQ13275 785 aa8.36□□□□□ -1.07
APP-206ENST00000359726 ZNF268Q14587 947 aaPredicted RBP8.36□□□□□ -1.07
APP-206ENST00000359726 NPY5RQ15761 445 aa8.36□□□□□ -1.07
APP-206ENST00000359726 IMMTQ16891 758 aaKnown RBP8.36□□□□□ -1.07
APP-206ENST00000359726 NBPF9Q3BBW0 867 aa8.36□□□□□ -1.07
APP-206ENST00000359726 TBC1D25Q3MII6 688 aa8.36□□□□□ -1.07
APP-206ENST00000359726 OXER1Q8TDS5 423 aa8.36□□□□□ -1.07
APP-206ENST00000359726 SMCR8Q8TEV9 937 aaPredicted RBP8.36□□□□□ -1.07
APP-206ENST00000359726 CASKIN2Q8WXE0 1202 aa8.36□□□□□ -1.07
APP-206ENST00000359726 CCDC43Q96MW1 224 aaKnown RBP8.36□□□□□ -1.07
APP-206ENST00000359726 ZNF317Q96PQ6 595 aaPredicted RBP8.36□□□□□ -1.07
APP-206ENST00000359726 VPS16Q9H269 839 aa8.36□□□□□ -1.07
APP-206ENST00000359726 TBC1D2BQ9UPU7 963 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms