RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 USP17L10C9JJH3 530 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 CUTAO60888 179 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 PTGER2P43116 358 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 ICA1Q05084 483 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 IL17AQ16552 155 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 METTL16Q86W50 562 aaKnown RBP14.4□□□□□ -0.1
GGPS1-202ENST00000358966 ADGRF4Q8IZF3 695 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 RRP36Q96EU6 259 aaKnown RBP14.4□□□□□ -0.1
GGPS1-202ENST00000358966 UIMC1Q96RL1 719 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 YY1AP1Q9H869 796 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 BIN2Q9UBW5 565 aaPredicted RBP14.4□□□□□ -0.1
GGPS1-202ENST00000358966 SEC63Q9UGP8 760 aaKnown RBP14.4□□□□□ -0.1
GGPS1-202ENST00000358966 SMCHD1A6NHR9 2005 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 CNTNAP1P78357 1384 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 LOC102724159A0A0B4J2E5 919 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 WNT10BO00744 389 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 ECE1P42892 770 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 ZNF543Q08ER8 600 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 PWP2Q15269 919 aaKnown RBP14.4□□□□□ -0.1
GGPS1-202ENST00000358966 JAKMIP3Q5VZ66 844 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 FOXP4Q8IVH2 680 aaPredicted RBP14.4□□□□□ -0.1
GGPS1-202ENST00000358966 STAMQ92783 540 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 GJA3Q9Y6H8 435 aa14.4□□□□□ -0.1
GGPS1-202ENST00000358966 GREB1LQ9C091 1923 aaPredicted RBP14.39□□□□□ -0.11
GGPS1-202ENST00000358966 A0A1W2PRG0 241 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 SMCO2A6NFE2 343 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 M0R2N6 131 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 SLFN14P0C7P3 912 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 ZYXQ15942 572 aaKnown RBP14.39□□□□□ -0.11
GGPS1-202ENST00000358966 ABCB5Q2M3G0 1257 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 SAMD7Q7Z3H4 446 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 JDP2Q8WYK2 163 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 JMJD4Q9H9V9 463 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 KIAA1468Q9P260 1216 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 SPC24Q8NBT2 197 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 SYMPKQ92797 1274 aaKnown RBP14.39□□□□□ -0.11
GGPS1-202ENST00000358966 UPF1Q92900 1129 aaKnown RBP eCLIP14.39□□□□□ -0.11
GGPS1-202ENST00000358966 TMEM60Q9H2L4 133 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.39□□□□□ -0.11
GGPS1-202ENST00000358966 SERTAD1Q9UHV2 236 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 SRPRBQ9Y5M8 271 aaKnown RBP14.39□□□□□ -0.11
GGPS1-202ENST00000358966 FER1L6Q2WGJ9 1857 aa14.39□□□□□ -0.11
GGPS1-202ENST00000358966 CCDC194A0A1B0GVG4 234 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 PP2D1A8MPX8 630 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 GABPB1Q06547 395 aaPredicted RBP14.38□□□□□ -0.11
GGPS1-202ENST00000358966 UBE2SQ16763 222 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 TATDN1Q6P1N9 297 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 CNNM3Q8NE01 707 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 DHX58Q96C10 678 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 TRERF1Q96PN7 1200 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 TMOD2Q9NZR1 351 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 FZD1Q9UP38 647 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 CIAPIN1Q6FI81 312 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 ACER1Q8TDN7 264 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 RIOX1Q9H6W3 641 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 HDAC9Q9UKV0 1011 aa14.38□□□□□ -0.11
GGPS1-202ENST00000358966 SLC1A4P43007 532 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 STX1AQ16623 288 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 SPDYE2Q495Y8 402 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 KIAA1755Q5JYT7 1200 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 GLIS2Q9BZE0 524 aaPredicted RBP14.37□□□□□ -0.11
GGPS1-202ENST00000358966 CCDC39Q9UFE4 941 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 ATRNL1Q5VV63 1379 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 CTAGE5O15320 804 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 CALML3P27482 149 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 LETM2Q2VYF4 491 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
GGPS1-202ENST00000358966 KRBA2Q6ZNG9 492 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 CCDC125Q86Z20 511 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 AOPEPQ8N6M6 819 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 MYO3BQ8WXR4 1341 aa14.37□□□□□ -0.11
GGPS1-202ENST00000358966 ENTPD3O75355 529 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 AFMP43652 599 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 ZRSR1Q15695 479 aaKnown RBP14.36□□□□□ -0.11
GGPS1-202ENST00000358966 ASPRV1Q53RT3 343 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 PRAMEF18Q5VWM3 479 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 SLFN13Q68D06 897 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 EP400NLQ6ZTU2 488 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 PLIN2Q99541 437 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 ZMYND12Q9H0C1 365 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 MYOZ2Q9NPC6 264 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 F5H6K3 240 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 ATP2C1P98194 919 aaPredicted RBP14.36□□□□□ -0.11
GGPS1-202ENST00000358966 KLRC3Q07444 240 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 DGKZQ13574 1117 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 IQCB1Q15051 598 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 CCDC148Q8NFR7 591 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 GJA10Q969M2 543 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 CCDC17Q96LX7 622 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 LZTS2Q9BRK4 669 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 KANSL2Q9H9L4 492 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 SH3GLB2Q9NR46 395 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 OGFRQ9NZT2 677 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 CEP131Q9UPN4 1083 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 PCDHA5Q9Y5H7 936 aa14.36□□□□□ -0.11
GGPS1-202ENST00000358966 NDUFB10O96000 172 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 NT5C2P49902 561 aa14.35□□□□□ -0.11
GGPS1-202ENST00000358966 IKQ13123 557 aaPredicted RBP14.35□□□□□ -0.11
GGPS1-202ENST00000358966 DHX40Q8IX18 779 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms