RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 SUSD4Q5VX71 490 aa16.06■□□□□ 0.16
APP-205ENST00000358918 RIC1Q4ADV7 1423 aa16.05■□□□□ 0.16
APP-205ENST00000358918 LGALS16A8MUM7 142 aa16.05■□□□□ 0.16
APP-205ENST00000358918 PES1O00541 588 aaKnown RBP16.05■□□□□ 0.16
APP-205ENST00000358918 EMBQ6PCB8 327 aa16.05■□□□□ 0.16
APP-205ENST00000358918 WDR59Q6PJI9 974 aa16.05■□□□□ 0.16
APP-205ENST00000358918 ARL8AQ96BM9 186 aa16.05■□□□□ 0.16
APP-205ENST00000358918 CNNM2Q9H8M5 875 aa16.05■□□□□ 0.16
APP-205ENST00000358918 INCENPQ9NQS7 918 aa16.05■□□□□ 0.16
APP-205ENST00000358918 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
APP-205ENST00000358918 XDHP47989 1333 aa16.05■□□□□ 0.16
APP-205ENST00000358918 PARP1P09874 1014 aaKnown RBP16.05■□□□□ 0.16
APP-205ENST00000358918 ITIH3Q06033 890 aa16.05■□□□□ 0.16
APP-205ENST00000358918 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
APP-205ENST00000358918 LRRC1Q9BTT6 524 aa16.05■□□□□ 0.16
APP-205ENST00000358918 LACRTQ9GZZ8 138 aa16.05■□□□□ 0.16
APP-205ENST00000358918 RMND1Q9NWS8 449 aa16.05■□□□□ 0.16
APP-205ENST00000358918 VPS54Q9P1Q0 977 aa16.05■□□□□ 0.16
APP-205ENST00000358918 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
APP-205ENST00000358918 H7C1D1 291 aa16.04■□□□□ 0.16
APP-205ENST00000358918 CHUKO15111 745 aa16.04■□□□□ 0.16
APP-205ENST00000358918 GTPBP6O43824 516 aaPredicted RBP16.04■□□□□ 0.16
APP-205ENST00000358918 XBP1P17861 261 aa16.04■□□□□ 0.16
APP-205ENST00000358918 WTAPQ15007 396 aa16.04■□□□□ 0.16
APP-205ENST00000358918 UBE3CQ15386 1083 aa16.04■□□□□ 0.16
APP-205ENST00000358918 EZH2Q15910 746 aaKnown RBP16.04■□□□□ 0.16
APP-205ENST00000358918 MEA1Q16626 185 aa16.04■□□□□ 0.16
APP-205ENST00000358918 ZNF658Q5TYW1 1059 aaPredicted RBP16.04■□□□□ 0.16
APP-205ENST00000358918 YTHDF3Q7Z739 585 aaKnown RBP16.04■□□□□ 0.16
APP-205ENST00000358918 HDAC7Q8WUI4 952 aa16.04■□□□□ 0.16
APP-205ENST00000358918 TSGA10Q9BZW7 698 aa16.04■□□□□ 0.16
APP-205ENST00000358918 KRT23Q9C075 422 aa16.04■□□□□ 0.16
APP-205ENST00000358918 SNX12Q9UMY4 172 aa16.04■□□□□ 0.16
APP-205ENST00000358918 MYH8P13535 1937 aa16.04■□□□□ 0.16
APP-205ENST00000358918 FAM205CA6NFA0 338 aa16.04■□□□□ 0.16
APP-205ENST00000358918 ZEB2O60315 1214 aa16.04■□□□□ 0.16
APP-205ENST00000358918 IDH1O75874 414 aaKnown RBP16.04■□□□□ 0.16
APP-205ENST00000358918 CAMTA2O94983 1202 aa16.04■□□□□ 0.16
APP-205ENST00000358918 MCAMP43121 646 aa16.04■□□□□ 0.16
APP-205ENST00000358918 KIF5AQ12840 1032 aa16.04■□□□□ 0.16
APP-205ENST00000358918 NEDD9Q14511 834 aa16.04■□□□□ 0.16
APP-205ENST00000358918 ZNF572Q7Z3I7 529 aaPredicted RBP16.04■□□□□ 0.16
APP-205ENST00000358918 CCDC170Q8IYT3 715 aa16.04■□□□□ 0.16
APP-205ENST00000358918 TSEN2Q8NCE0 465 aaKnown RBP16.04■□□□□ 0.16
APP-205ENST00000358918 CAVIN3Q969G5 261 aa16.04■□□□□ 0.16
APP-205ENST00000358918 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
APP-205ENST00000358918 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
APP-205ENST00000358918 DMGDHQ9UI17 866 aaKnown RBP16.04■□□□□ 0.16
APP-205ENST00000358918 ZNF532Q9HCE3 1301 aa16.03■□□□□ 0.16
APP-205ENST00000358918 RCCD1A6NED2 376 aa16.03■□□□□ 0.16
APP-205ENST00000358918 KRT2P35908 639 aa16.03■□□□□ 0.16
APP-205ENST00000358918 KCNQ4P56696 695 aa16.03■□□□□ 0.16
APP-205ENST00000358918 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
APP-205ENST00000358918 ALX1Q15699 326 aa16.03■□□□□ 0.16
APP-205ENST00000358918 CREG2Q8IUH2 290 aa16.03■□□□□ 0.16
APP-205ENST00000358918 CMTR1Q8N1G2 835 aaKnown RBP16.03■□□□□ 0.16
APP-205ENST00000358918 PYM1Q9BRP8 204 aaKnown RBP16.03■□□□□ 0.16
APP-205ENST00000358918 ERICH2A1L162 156 aa16.02■□□□□ 0.16
APP-205ENST00000358918 ATP1A2P50993 1020 aa16.02■□□□□ 0.16
APP-205ENST00000358918 NAP1L1P55209 391 aaKnown RBP16.02■□□□□ 0.16
APP-205ENST00000358918 NAPBQ9H115 298 aa16.02■□□□□ 0.16
APP-205ENST00000358918 EPN3Q9H201 632 aa16.02■□□□□ 0.16
APP-205ENST00000358918 NHEJ1Q9H9Q4 299 aaPredicted RBP16.02■□□□□ 0.16
APP-205ENST00000358918 C21orf2O43822 256 aa16.02■□□□□ 0.15
APP-205ENST00000358918 EEF1GP26641 437 aaKnown RBP16.02■□□□□ 0.15
APP-205ENST00000358918 NNTQ13423 1086 aa16.02■□□□□ 0.15
APP-205ENST00000358918 RNF187Q5TA31 235 aaPredicted RBP16.02■□□□□ 0.15
APP-205ENST00000358918 KDM7AQ6ZMT4 941 aa16.02■□□□□ 0.15
APP-205ENST00000358918 SPATA4Q8NEY3 305 aa16.02■□□□□ 0.15
APP-205ENST00000358918 TRIM58Q8NG06 486 aa16.02■□□□□ 0.15
APP-205ENST00000358918 HELBQ8NG08 1087 aaPredicted RBP16.02■□□□□ 0.15
APP-205ENST00000358918 ZKSCAN4Q969J2 545 aaPredicted RBP16.02■□□□□ 0.15
APP-205ENST00000358918 ZNF622Q969S3 477 aaKnown RBP eCLIP16.02■□□□□ 0.15
APP-205ENST00000358918 CD248Q9HCU0 757 aa16.02■□□□□ 0.15
APP-205ENST00000358918 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.15
APP-205ENST00000358918 STIM2Q9P246 746 aa16.02■□□□□ 0.15
APP-205ENST00000358918 MAGEC2Q9UBF1 373 aaPredicted RBP16.02■□□□□ 0.15
APP-205ENST00000358918 NIP7Q9Y221 180 aaKnown RBP eCLIP16.02■□□□□ 0.15
APP-205ENST00000358918 PDS5AQ29RF7 1337 aaKnown RBP16.02■□□□□ 0.15
APP-205ENST00000358918 TACC1O75410 805 aa16.01■□□□□ 0.15
APP-205ENST00000358918 PDE6AP16499 860 aa16.01■□□□□ 0.15
APP-205ENST00000358918 LSP1P33241 339 aa16.01■□□□□ 0.15
APP-205ENST00000358918 VAV2P52735 878 aa16.01■□□□□ 0.15
APP-205ENST00000358918 SLC7A5Q01650 507 aa16.01■□□□□ 0.15
APP-205ENST00000358918 APBA1Q02410 837 aa16.01■□□□□ 0.15
APP-205ENST00000358918 PLCB4Q15147 1175 aa16.01■□□□□ 0.15
APP-205ENST00000358918 RRP12Q5JTH9 1297 aaKnown RBP16.01■□□□□ 0.15
APP-205ENST00000358918 AKNAD1Q5T1N1 836 aa16.01■□□□□ 0.15
APP-205ENST00000358918 NAA35Q5VZE5 725 aa16.01■□□□□ 0.15
APP-205ENST00000358918 SH2D3CQ8N5H7 860 aa16.01■□□□□ 0.15
APP-205ENST00000358918 VGLL2Q8N8G2 317 aa16.01■□□□□ 0.15
APP-205ENST00000358918 NUP133Q8WUM0 1156 aa16.01■□□□□ 0.15
APP-205ENST00000358918 ZIM3Q96PE6 472 aa16.01■□□□□ 0.15
APP-205ENST00000358918 MYH14Q7Z406 1995 aaKnown RBP16.01■□□□□ 0.15
APP-205ENST00000358918 MYH3P11055 1940 aa16.01■□□□□ 0.15
APP-205ENST00000358918 RPN1P04843 607 aaKnown RBP16.01■□□□□ 0.15
APP-205ENST00000358918 TNFRSF8P28908 595 aa16.01■□□□□ 0.15
APP-205ENST00000358918 MATR3P43243 847 aaKnown RBP eCLIP16.01■□□□□ 0.15
APP-205ENST00000358918 ZNF174Q15697 407 aa16.01■□□□□ 0.15
APP-205ENST00000358918 VPS72Q15906 364 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms