RNA–Protein interactions for RNA: ENST00000358438.6

POLR2J2-202, Transcript of RNA polymerase II subunit J2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J2, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2-202ENST00000358438 ERCC6LQ2NKX8 1250 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 C11orf57Q6ZUT1 292 aaPredicted RBP25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 MTMR14Q8NCE2 650 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 MRPS27Q92552 414 aaKnown RBP25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 NAT10Q9H0A0 1025 aaKnown RBP25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 SH3GLB2Q9NR46 395 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 TRMT1Q9NXH9 659 aaKnown RBP25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 LTBP3Q9NS15 1303 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 TCP10L2B9ZVM9 353 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 PPP6R2O75170 966 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 RAD51AP2Q09MP3 1159 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 GPS2Q13227 327 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 JMYQ8N9B5 988 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 FSIP1Q8NA03 581 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 CSRNP1Q96S65 589 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 UBXN6Q9BZV1 441 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 CABP5Q9NP86 173 aa25.35■■□□□ 1.65
POLR2J2-202ENST00000358438 PHLPP2Q6ZVD8 1323 aa25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 ARFGEF1Q9Y6D6 1849 aa25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 SMARCA1P28370 1054 aa25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 MARCKSP29966 332 aaPredicted RBP25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 NLRP5P59047 1200 aa25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 FAM160A1Q05DH4 1040 aa25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 SPDYE2Q495Y8 402 aa25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 AXDND1Q5T1B0 1012 aaPredicted RBP25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 DHX40Q8IX18 779 aaKnown RBP25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.34■■□□□ 1.65
POLR2J2-202ENST00000358438 SNHG28P0DPA3 235 aa25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 CEP57L1Q8IYX8 460 aa25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 ENGASEQ8NFI3 743 aa25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 GPKOWQ92917 476 aaPredicted RBP eCLIP25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 TNFRSF25Q93038 417 aa25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 PPP1R13BQ96KQ4 1090 aa25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 CPVLQ9H3G5 476 aa25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 TNIP1Q15025 636 aa25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 ASPRV1Q53RT3 343 aa25.33■■□□□ 1.65
POLR2J2-202ENST00000358438 E4F1Q66K89 784 aaPredicted RBP25.32■■□□□ 1.64
POLR2J2-202ENST00000358438 FAM151AQ8WW52 585 aa25.32■■□□□ 1.64
POLR2J2-202ENST00000358438 CALML3P27482 149 aa25.32■■□□□ 1.64
POLR2J2-202ENST00000358438 ARHGAP29Q52LW3 1261 aa25.32■■□□□ 1.64
POLR2J2-202ENST00000358438 EARS2Q5JPH6 523 aaKnown RBP25.32■■□□□ 1.64
POLR2J2-202ENST00000358438 WWC2Q6AWC2 1192 aa25.32■■□□□ 1.64
POLR2J2-202ENST00000358438 FAM205CA6NFA0 338 aa25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 ATP2B2Q01814 1243 aa25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 SHROOM1Q2M3G4 852 aaPredicted RBP25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 FKBP1CQ5VVH2 108 aa25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 KANSL2Q9H9L4 492 aa25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 BARHL2Q9NY43 387 aa25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 PCDHB6Q9Y5E3 794 aa25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 CNTNAP1P78357 1384 aa25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 FRMPD2Q68DX3 1309 aaPredicted RBP25.31■■□□□ 1.64
POLR2J2-202ENST00000358438 A0A1B0GVL5 298 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 RASSF7Q02833 373 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 TYW1BQ6NUM6 668 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 HEATR3Q7Z4Q2 680 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 UBXN4Q92575 508 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 ZBED3Q96IU2 234 aaPredicted RBP25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 HERC5Q9UII4 1024 aaKnown RBP25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 MYO1BO43795 1136 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 CMA1P23946 247 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 TMEM179Q6ZVK1 233 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 FMR1NBQ8N0W7 255 aaPredicted RBP25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 RRP36Q96EU6 259 aaKnown RBP25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 BPIFA3Q9BQP9 254 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 VEZTQ9HBM0 779 aa25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 CWC15Q9P013 229 aaKnown RBP25.3■■□□□ 1.64
POLR2J2-202ENST00000358438 KINO60870 393 aaKnown RBP25.29■■□□□ 1.64
POLR2J2-202ENST00000358438 NDUFA8P51970 172 aa25.29■■□□□ 1.64
POLR2J2-202ENST00000358438 ABCB5Q2M3G0 1257 aa25.29■■□□□ 1.64
POLR2J2-202ENST00000358438 FAM177A1Q8N128 213 aaPredicted RBP25.29■■□□□ 1.64
POLR2J2-202ENST00000358438 CCDC148Q8NFR7 591 aa25.29■■□□□ 1.64
POLR2J2-202ENST00000358438 RIOX1Q9H6W3 641 aa25.29■■□□□ 1.64
POLR2J2-202ENST00000358438 MYOZ2Q9NPC6 264 aa25.29■■□□□ 1.64
POLR2J2-202ENST00000358438 NYAP2Q9P242 653 aa25.29■■□□□ 1.64
POLR2J2-202ENST00000358438 STXBP3O00186 592 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 WNT10BO00744 389 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 EEF2P13639 858 aaKnown RBP25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 ZNF543Q08ER8 600 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 MKL1Q969V6 931 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 UBA5Q9GZZ9 404 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 SEC63Q9UGP8 760 aaKnown RBP25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 CEP131Q9UPN4 1083 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 GDF11O95390 407 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 ATP2B1P20020 1258 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 SEPT2Q15019 361 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 SYT10Q6XYQ8 523 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 HOMER1Q86YM7 354 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 BLIDQ8IZY5 108 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 PSD3Q9NYI0 1048 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 PCDHA4Q9UN74 947 aa25.28■■□□□ 1.64
POLR2J2-202ENST00000358438 EFCAB8A8MWE9 144 aa25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 RPS12P25398 132 aaKnown RBP25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 MMP14P50281 582 aa25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 PRELPP51888 382 aa25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 ETF1P62495 437 aaKnown RBP25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 NOM1Q5C9Z4 860 aaKnown RBP25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 RASSF4Q9H2L5 321 aa25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 VAT1LQ9HCJ6 419 aa25.27■■□□□ 1.64
POLR2J2-202ENST00000358438 SHTN1A0MZ66 631 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms