RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 FAM169AQ9Y6X4 670 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 METP08581 1390 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 HEXIM1O94992 359 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 ZNF658Q5TYW1 1059 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 VPS52Q8N1B4 723 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 KLHL14Q9P2G3 628 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 STK38LQ9Y2H1 464 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 RIPOR2Q9Y4F9 1068 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 SLC8A1P32418 973 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 ADD2P35612 726 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 RASSF2P50749 326 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 ARHGAP24Q8N264 748 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 FNBP4Q8N3X1 1017 aaPredicted RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 MAK16Q9BXY0 300 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 PUS7LQ9H0K6 701 aaKnown RBP17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 EPB41L5Q9HCM4 733 aa17.18■□□□□ 0.34
TRAPPC11-202ENST00000357207 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 SP4Q02446 784 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 CC2D1AQ6P1N0 951 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 CCDC62Q6P9F0 684 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 MAEAQ7L5Y9 396 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 FMR1NBQ8N0W7 255 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 P2RX5Q93086 422 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 MORC2Q9Y6X9 1032 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 HIP1RO75146 1068 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 LIFRP42702 1097 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 ZBED6P86452 979 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 ANKRD20A3Q5VUR7 823 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 RDH13Q8NBN7 331 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 EXOC7Q9UPT5 735 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 USP27XA6NNY8 438 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 ADAM9Q13443 819 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 GJB4Q9NTQ9 266 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 JRKLQ9Y4A0 524 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 PCDHB6Q9Y5E3 794 aa17.17■□□□□ 0.34
TRAPPC11-202ENST00000357207 CLTAP09496 248 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 APBB1IPQ7Z5R6 666 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 ZSWIM5Q9P217 1185 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 MYO1CO00159 1063 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 PI16Q6UXB8 463 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 RNF10Q8N5U6 811 aaKnown RBP17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 PANK4Q9NVE7 773 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 RWDD2AQ9UIY3 292 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 GNPATO15228 680 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 GYS2P54840 703 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 IRX5P78411 483 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 CNBD1Q8NA66 436 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 MPHOSPH6Q99547 160 aaKnown RBP17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 VEZTQ9HBM0 779 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 METTL14Q9HCE5 456 aaKnown RBP17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.16■□□□□ 0.344e-6■■■□□ 17.1
TRAPPC11-202ENST00000357207 RNF14Q9UBS8 474 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 USTQ9Y2C2 406 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 UHMK1Q8TAS1 419 aaKnown RBP17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 VCXQ9H320 206 aa17.16■□□□□ 0.34
TRAPPC11-202ENST00000357207 SARNPP82979 210 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 MAP7D1Q3KQU3 841 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 ADAT2Q7Z6V5 191 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 MFAP3LO75121 409 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 CYP27A1Q02318 531 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 GOLPH3LQ9H4A5 285 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 GOLGA8HP0CJ92 632 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 HARSP12081 509 aaKnown RBP17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 EPSTI1Q96J88 318 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 USP6P35125 1406 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 PRR36Q9H6K5 1346 aa17.15■□□□□ 0.34
TRAPPC11-202ENST00000357207 CDC25AP30304 524 aa17.14■□□□□ 0.34
TRAPPC11-202ENST00000357207 DCUN1D2Q6PH85 259 aa17.14■□□□□ 0.34
TRAPPC11-202ENST00000357207 TRPM1Q7Z4N2 1603 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 FAM170AA1A519 330 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 LAD1O00515 517 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 CXCR5P32302 372 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 HSPA1LP34931 641 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 MAN2A1Q16706 1144 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 NAA35Q5VZE5 725 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 ZCCHC17Q9NP64 241 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 TBC1D8O95759 1140 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 MYO5CQ9NQX4 1742 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 PTPREP23469 700 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 C2orf54Q08AI8 447 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 PAGE5Q96GU1 130 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 AK8Q96MA6 479 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 ANAPC4Q9UJX5 808 aa17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 BZW2Q9Y6E2 419 aaKnown RBP17.14■□□□□ 0.33
TRAPPC11-202ENST00000357207 CYP2J2P51589 502 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 KRT31Q15323 416 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 SNCBQ16143 134 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 SH2D4AQ9H788 454 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 ABCA8O94911 1581 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 TMEM232C9JQI7 657 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 MYL1P05976 194 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 CCNE1P24864 410 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 FKBP3Q00688 224 aaKnown RBP17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 EXOC3L4Q17RC7 722 aa17.13■□□□□ 0.33
TRAPPC11-202ENST00000357207 CCDC14Q49A88 953 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms