RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 BARHL2Q9NY43 387 aa27.73■■■□□ 2.03
CHKA-202ENST00000356135 ZBTB48P10074 688 aaPredicted RBP27.72■■■□□ 2.03
CHKA-202ENST00000356135 GTF2A2P52657 109 aa27.72■■■□□ 2.03
CHKA-202ENST00000356135 AGTPBP1Q9UPW5 1226 aa27.72■■■□□ 2.03
CHKA-202ENST00000356135 CCL15-CCL14A0A0B4J2E2 113 aa27.71■■■□□ 2.03
CHKA-202ENST00000356135 ADAMTS3O15072 1205 aa27.71■■■□□ 2.03
CHKA-202ENST00000356135 ZSCAN22P10073 491 aaPredicted RBP27.71■■■□□ 2.03
CHKA-202ENST00000356135 DSG3P32926 999 aa27.71■■■□□ 2.03
CHKA-202ENST00000356135 CCL15Q16663 113 aa27.71■■■□□ 2.03
CHKA-202ENST00000356135 BRI3BPQ8WY22 251 aa27.71■■■□□ 2.03
CHKA-202ENST00000356135 LOC285556D6RIA3 1793 aa27.71■■■□□ 2.03
CHKA-202ENST00000356135 HOXA7P31268 230 aaPredicted RBP27.71■■■□□ 2.03
CHKA-202ENST00000356135 USH1GQ495M9 461 aa27.71■■■□□ 2.03
CHKA-202ENST00000356135 WDR33Q9C0J8 1336 aaKnown RBP27.7■■■□□ 2.03
CHKA-202ENST00000356135 CETPP11597 493 aa27.7■■■□□ 2.02
CHKA-202ENST00000356135 MCTP1Q6DN14 999 aa27.7■■■□□ 2.02
CHKA-202ENST00000356135 PHF20Q9BVI0 1012 aa27.7■■■□□ 2.02
CHKA-202ENST00000356135 DDX11L8A8MPP1 907 aa27.69■■■□□ 2.02
CHKA-202ENST00000356135 VWA5AO00534 786 aa27.69■■■□□ 2.02
CHKA-202ENST00000356135 XBP1P17861 261 aa27.69■■■□□ 2.02
CHKA-202ENST00000356135 NAPAP54920 295 aa27.69■■■□□ 2.02
CHKA-202ENST00000356135 NLRP5P59047 1200 aa27.69■■■□□ 2.02
CHKA-202ENST00000356135 FBXO11Q86XK2 927 aa27.69■■■□□ 2.02
CHKA-202ENST00000356135 P2RX7Q99572 595 aaKnown RBP27.69■■■□□ 2.02
CHKA-202ENST00000356135 SLC38A10Q9HBR0 1119 aa27.69■■■□□ 2.02
CHKA-202ENST00000356135 PCDHA1Q9Y5I3 950 aa27.69■■■□□ 2.02
CHKA-202ENST00000356135 SPDYE16A6NNV3 312 aaPredicted RBP27.68■■■□□ 2.02
CHKA-202ENST00000356135 MMP1P03956 469 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 PDIA4P13667 645 aaKnown RBP27.68■■■□□ 2.02
CHKA-202ENST00000356135 FOXD4L6Q3SYB3 417 aaPredicted RBP27.68■■■□□ 2.02
CHKA-202ENST00000356135 FOXD4L3Q6VB84 417 aaPredicted RBP27.68■■■□□ 2.02
CHKA-202ENST00000356135 CPXCR1Q8N123 301 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 AGBL1Q96MI9 1066 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 AMNQ9BXJ7 453 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 ASCC2Q9H1I8 757 aaPredicted RBP27.68■■■□□ 2.02
CHKA-202ENST00000356135 ZNF536O15090 1300 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 RLFQ13129 1914 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 FAM155AB1AL88 458 aaPredicted RBP27.68■■■□□ 2.02
CHKA-202ENST00000356135 BTBD19C9JJ37 291 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 PEX10O60683 326 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 SLC10A3P09131 477 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 GRM1Q13255 1194 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 NPY5RQ15761 445 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 POTEEQ6S8J3 1075 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 OXER1Q8TDS5 423 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 CHAMP1Q96JM3 812 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 PTPN18Q99952 460 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 RAVER2Q9HCJ3 691 aaKnown RBP27.68■■■□□ 2.02
CHKA-202ENST00000356135 SH3GLB2Q9NR46 395 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 HOXC10Q9NYD6 342 aa27.68■■■□□ 2.02
CHKA-202ENST00000356135 KIF28PB7ZC32 967 aa27.67■■■□□ 2.02
CHKA-202ENST00000356135 BAG4O95429 457 aaKnown RBP27.67■■■□□ 2.02
CHKA-202ENST00000356135 F13A1P00488 732 aa27.67■■■□□ 2.02
CHKA-202ENST00000356135 ADAMTS5Q9UNA0 930 aa27.67■■■□□ 2.02
CHKA-202ENST00000356135 PARP14Q460N5 1801 aa27.67■■■□□ 2.02
CHKA-202ENST00000356135 SMCO2A6NFE2 343 aa27.66■■■□□ 2.02
CHKA-202ENST00000356135 BTBD18B2RXH4 712 aa27.66■■■□□ 2.02
CHKA-202ENST00000356135 ZBED4O75132 1171 aa27.66■■■□□ 2.02
CHKA-202ENST00000356135 IRX3P78415 501 aaPredicted RBP27.66■■■□□ 2.02
CHKA-202ENST00000356135 PAXIP1Q6ZW49 1069 aaPredicted RBP27.66■■■□□ 2.02
CHKA-202ENST00000356135 APLP1P51693 650 aa27.65■■■□□ 2.02
CHKA-202ENST00000356135 CYP4F22Q6NT55 531 aa27.65■■■□□ 2.02
CHKA-202ENST00000356135 FAM173BQ6P4H8 233 aa27.65■■■□□ 2.02
CHKA-202ENST00000356135 DIS3L2Q8IYB7 885 aaKnown RBP27.65■■■□□ 2.02
CHKA-202ENST00000356135 FAM43AQ8N2R8 423 aa27.65■■■□□ 2.02
CHKA-202ENST00000356135 REPS2Q8NFH8 660 aa27.65■■■□□ 2.02
CHKA-202ENST00000356135 KIF23Q02241 960 aaPredicted RBP27.65■■■□□ 2.02
CHKA-202ENST00000356135 RESTQ13127 1097 aa27.65■■■□□ 2.02
CHKA-202ENST00000356135 NR5A1Q13285 461 aa27.65■■■□□ 2.02
CHKA-202ENST00000356135 CTDP1Q9Y5B0 961 aaPredicted RBP27.65■■■□□ 2.02
CHKA-202ENST00000356135 PDHXO00330 501 aa27.64■■■□□ 2.02
CHKA-202ENST00000356135 CYP2C8P10632 490 aa27.64■■■□□ 2.02
CHKA-202ENST00000356135 TMEM132BQ14DG7 1078 aa27.64■■■□□ 2.02
CHKA-202ENST00000356135 ZIC5Q96T25 663 aa27.64■■■□□ 2.02
CHKA-202ENST00000356135 ZMYND12Q9H0C1 365 aa27.64■■■□□ 2.02
CHKA-202ENST00000356135 hCG_1984214I3L0E3 225 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 ICAM1P05362 532 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 OSBPP22059 807 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 ZNF713Q8N859 430 aaPredicted RBP27.63■■■□□ 2.01
CHKA-202ENST00000356135 CCDC148Q8NFR7 591 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 CCDC102AQ96A19 550 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 CCPG1Q9ULG6 757 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 HERVK_113P62684 666 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 PABPC4Q13310 644 aaKnown RBP eCLIP27.63■■■□□ 2.018e-18■■■■■ 28.5
CHKA-202ENST00000356135 SAFBQ15424 915 aaKnown RBP eCLIP27.63■■■□□ 2.01
CHKA-202ENST00000356135 HHIPL1Q96JK4 782 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 CREBZFQ9NS37 354 aa27.63■■■□□ 2.01
CHKA-202ENST00000356135 MYPNQ86TC9 1320 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 SMCHD1A6NHR9 2005 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 TESPA1A2RU30 521 aaPredicted RBP27.62■■■□□ 2.01
CHKA-202ENST00000356135 PTMSP20962 102 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 KRT2P35908 639 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 NOM1Q5C9Z4 860 aaKnown RBP27.62■■■□□ 2.01
CHKA-202ENST00000356135 ANKRD23Q86SG2 305 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 RGS22Q8NE09 1264 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 RASGRP4Q8TDF6 673 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 CCDC12Q8WUD4 166 aaPredicted RBP27.62■■■□□ 2.01
CHKA-202ENST00000356135 BTBD7Q9P203 1132 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 PCDHA4Q9UN74 947 aa27.62■■■□□ 2.01
CHKA-202ENST00000356135 HTRA3P83110 453 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms