RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 TNFAIP1Q13829 316 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 RASIP1Q5U651 963 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ARMCX5Q6P1M9 558 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 FAM178BQ8IXR5 827 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PCDH11XQ9BZA7 1347 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 PCDH11YQ9BZA8 1340 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 SGK1O00141 431 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 DCAF5Q96JK2 942 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 RPGRIP1Q96KN7 1286 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 SUGCTQ9HAC7 445 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 CTDSPL2Q05D32 466 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 TRIM4Q9C037 500 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 IFT122Q9HBG6 1241 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 hCG_1642624A0A1W2PR95 340 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 TECP42680 631 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 MYSM1Q5VVJ2 828 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 EFHD1Q9BUP0 239 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 ATP8A2Q9NTI2 1148 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 IBTKQ9P2D0 1353 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 RASEFQ8IZ41 740 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 TPCN1Q9ULQ1 816 aa6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.32□□□□□ -1.4
SRGAP1-201ENST00000355086 SLC8A1P32418 973 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 GDAP1L1Q96MZ0 367 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 APOL6Q9BWW8 343 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PANK4Q9NVE7 773 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 FRMPD2Q68DX3 1309 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 SCAF11Q99590 1463 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 NPR1P16066 1061 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ANKRD35Q8N283 1001 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 SPATA17Q96L03 361 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 RALGAPBQ86X10 1494 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ESRRGP62508 458 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 MCF2L2Q86YR7 1114 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ANKRD36BP1Q96IX9 119 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 CEP19Q96LK0 163 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 MAP3K5Q99683 1374 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 F8W8V4 182 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 MORC3Q14149 939 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PSTPIP2Q9H939 334 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 SLC38A10Q9HBR0 1119 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 KRT10P13645 584 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 MAP2K2P36507 400 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PABPC4Q13310 644 aaKnown RBP eCLIP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PTPROQ16827 1216 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 METTL23Q86XA0 190 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 TBC1D22AQ8WUA7 517 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 NRBF2Q96F24 287 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 USP26Q9BXU7 913 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 CCDC87Q9NVE4 849 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 EFCAB5A4FU69 1503 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 LRRIQ4A6NIV6 560 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 TNNI3KQ59H18 835 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 RFX6Q8HWS3 928 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 GANCQ8TET4 914 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ZC4H2Q9NQZ6 224 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 AKT3Q9Y243 479 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 FPGT-TNNI3KV9GXZ4 949 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PPIP5K1Q6PFW1 1433 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 SMCO2A6NFE2 343 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 XPOTO43592 962 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 IL9RQ01113 521 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 FAM186BQ8IYM0 893 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 UBE2Q2Q8WVN8 375 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 USP40Q9NVE5 1235 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ALAS1P13196 640 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 RAP1GDS1P52306 607 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ABCF3Q9NUQ8 709 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 EIF4A2Q14240 407 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 GPR162Q16538 588 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 KDM2BQ8NHM5 1336 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PMLP29590 882 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 YWHAGP61981 247 aaKnown RBP eCLIP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 IGBP1P78318 339 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 TSC1Q92574 1164 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 POLR3CQ9BUI4 534 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 KIAA1841Q6NSI8 718 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PPM1KQ8N3J5 372 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 LPIN2Q92539 896 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 SPZ1Q9BXG8 430 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 FOXD4Q12950 439 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ARHGEF6Q15052 776 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 FAM160B1Q5W0V3 765 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 KDRP35968 1356 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 OCM2P0CE71 109 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 OCMP0CE72 109 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ATICP31939 592 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 PDE1BQ01064 536 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 SNX1Q13596 522 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 TBCCQ15814 346 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 MAP7D3Q8IWC1 876 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 BBOF1Q8ND07 529 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 ZNF233A6NK53 670 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 POC1B-GALNT4F8VUJ3 575 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 SUN1O94901 812 aa6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 MAGED2Q9UNF1 606 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 MRPL11Q9Y3B7 192 aaKnown RBP6.31□□□□□ -1.4
SRGAP1-201ENST00000355086 HYOU1Q9Y4L1 999 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms