RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 TTBK2Q6IQ55 1244 aa13.82□□□□□ -0.2
PCDHB11-201ENST00000354757 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
PCDHB11-201ENST00000354757 MPHOSPH6Q99547 160 aaKnown RBP13.82□□□□□ -0.2
PCDHB11-201ENST00000354757 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
PCDHB11-201ENST00000354757 NOP56O00567 594 aaKnown RBP13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 DDR1Q08345 913 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 PABPC4Q13310 644 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 ALX1Q15699 326 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 C11orf57Q6ZUT1 292 aaPredicted RBP13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 PLA2G4DQ86XP0 818 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 NELFBQ8WX92 580 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 SRRTQ9BXP5 876 aaKnown RBP13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 RNF181Q9P0P0 153 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 KIF28PB7ZC32 967 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 USO1O60763 962 aaKnown RBP13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 GCNT3O95395 438 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 ZNF75DP51815 510 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 STAT2P52630 851 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 FOXP4Q8IVH2 680 aaPredicted RBP13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 FLT1P17948 1338 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 PNPLA7Q6ZV29 1317 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 BICDL2A1A5D9 508 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 SPP2Q13103 211 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 ARHGEF16Q5VV41 709 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 TDRD7Q8NHU6 1098 aaKnown RBP13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 GUCA1BQ9UMX6 200 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 KIAA1024Q9UPX6 916 aa13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 LUC7L2Q9Y383 392 aaKnown RBP13.81□□□□□ -0.2
PCDHB11-201ENST00000354757 GTF2F1P35269 517 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 NFIAQ12857 509 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 GPBP1Q86WP2 473 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 GLT8D2Q9H1C3 349 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 TMEM260Q9NX78 707 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 NRXN3Q9Y4C0 1643 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 WRNIP1Q96S55 665 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 PCDHB13Q9Y5F0 798 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 F5H6K3 240 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 KLRC3Q07444 240 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 SRBD1Q8N5C6 995 aaKnown RBP13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 PAF1Q8N7H5 531 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 HOOK2Q96ED9 719 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 MRPL44Q9H9J2 332 aaKnown RBP13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 PIK3C2AO00443 1686 aa13.8□□□□□ -0.2
PCDHB11-201ENST00000354757 FGFR2P21802 821 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 CDC42EP5Q6NZY7 148 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 CNNM4Q6P4Q7 775 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 NLRX1Q86UT6 975 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 CCDC42Q96M95 316 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 EIF2AK2P19525 551 aaKnown RBP13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 ADKP55263 362 aaKnown RBP13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 DMTNQ08495 405 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 COL9A3Q14050 684 aaPredicted RBP13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 LRRC41Q15345 812 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 GLG1Q92896 1179 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 CRACR2AQ9BSW2 395 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 TSGA10IPQ3SY00 556 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 TMEM179Q6ZVK1 233 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 SAMD7Q7Z3H4 446 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 FAM207AQ9NSI2 230 aaPredicted RBP13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 ZHX2Q9Y6X8 837 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 SRGNP10124 158 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 AXDND1Q5T1B0 1012 aaPredicted RBP13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 NEK11Q8NG66 645 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 NLRC4Q9NPP4 1024 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 NRBP1Q9UHY1 535 aa13.79□□□□□ -0.2
PCDHB11-201ENST00000354757 PP2D1A8MPX8 630 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 GOLGA8FQ08AF8 430 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 GOLGA8DPQ0D2H9 430 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 SYT10Q6XYQ8 523 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 AS3MTQ9HBK9 375 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 SYDE2Q5VT97 1194 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 MIER3Q7Z3K6 550 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 KCNQ5Q9NR82 932 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 PSMD14O00487 310 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 KRT9P35527 623 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 RASA3Q14644 834 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 SLC10A5Q5PT55 438 aa13.78□□□□□ -0.2
PCDHB11-201ENST00000354757 PLEKHG2Q9H7P9 1386 aa13.77□□□□□ -0.2
PCDHB11-201ENST00000354757 ASNSP08243 561 aa13.77□□□□□ -0.2
PCDHB11-201ENST00000354757 SGMS1Q86VZ5 419 aa13.77□□□□□ -0.2
PCDHB11-201ENST00000354757 KRT222Q8N1A0 295 aa13.77□□□□□ -0.2
PCDHB11-201ENST00000354757 NAP1L4Q99733 375 aaKnown RBP13.77□□□□□ -0.2
PCDHB11-201ENST00000354757 POTEMA6NI47 508 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 BIRC3Q13489 604 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 BAG1Q99933 345 aaPredicted RBP13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 RFX7Q2KHR2 1363 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 A0A1W2PQ27 194 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 A0A1W2PQ64 194 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 A0A1W2PQD8 194 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 B4DLN1 442 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 MICALL2Q8IY33 904 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 NEDD1Q8NHV4 660 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 CTNNBL1Q8WYA6 563 aaPredicted RBP13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 TMEM39BQ9GZU3 492 aa13.77□□□□□ -0.21
PCDHB11-201ENST00000354757 OSBPL5Q9H0X9 879 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms