RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 CCDC122Q5T0U0 273 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 SYNE3Q6ZMZ3 975 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 TMTC1Q8IUR5 882 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 KCNH5Q8NCM2 988 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 SYT15Q9BQS2 421 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 FSD1Q9BTV5 496 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 EHD2Q9NZN4 543 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 THRAP3Q9Y2W1 955 aaKnown RBP11.82□□□□□ -0.52
CAPN3-203ENST00000349748 SPATA31A3Q5VYP0 1347 aa11.82□□□□□ -0.52
CAPN3-203ENST00000349748 SBNO1A3KN83 1393 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 CARMIL3Q8ND23 1372 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 MAP3K5Q99683 1374 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 FAM133BQ5BKY9 247 aaKnown RBP11.81□□□□□ -0.52
CAPN3-203ENST00000349748 RNF220Q5VTB9 566 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 CCDC102BQ68D86 513 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 MAATS1Q7Z4T9 603 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 CNGA4Q8IV77 575 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 GRAMD1CQ8IYS0 662 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 ENOX1Q8TC92 643 aaKnown RBP11.81□□□□□ -0.52
CAPN3-203ENST00000349748 CCHCR1Q8TD31 782 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 PSMB7Q99436 277 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 ABHD10Q9NUJ1 306 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 USP31Q70CQ4 1352 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 KDM6AO15550 1401 aaPredicted RBP11.81□□□□□ -0.52
CAPN3-203ENST00000349748 COBLO75128 1261 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 LUC7L3O95232 432 aaKnown RBP11.81□□□□□ -0.52
CAPN3-203ENST00000349748 ALDH3A1P30838 453 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 GNAQP50148 359 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 RIPK1Q13546 671 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 EMC10Q5UCC4 262 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 PPP4R3AQ6IN85 833 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 ANO7Q6IWH7 933 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 KLHL10Q6JEL2 608 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 LRRC59Q96AG4 307 aaKnown RBP11.81□□□□□ -0.52
CAPN3-203ENST00000349748 NAF1Q96HR8 494 aaKnown RBP11.81□□□□□ -0.52
CAPN3-203ENST00000349748 PREBQ9HCU5 417 aa11.81□□□□□ -0.52
CAPN3-203ENST00000349748 ZSCAN5CA6NGD5 496 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 LRRC10BA6NIK2 292 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 TRIM37O94972 964 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 KIF5BP33176 963 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 CCT6AP40227 531 aaKnown RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 G3BP1Q13283 466 aaKnown RBP eCLIP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 MKRN4PQ13434 485 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 CCDC57Q2TAC2 916 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 GKAP1Q5VSY0 366 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 GALNT17Q6IS24 598 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 CYP26C1Q6V0L0 522 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 CPLX4Q7Z7G2 160 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 ELOA2Q8IYF1 753 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 CLASRPQ8N2M8 674 aaKnown RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 HMG20BQ9P0W2 317 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 FAM208AQ9UK61 1670 aaKnown RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 NFU1Q9UMS0 254 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 GPR75-ASB3A0A0A6YYF3 556 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 CREB3O43889 395 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 TAF5LO75529 589 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 IDEP14735 1019 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 PBX1P40424 430 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 MPP3Q13368 585 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 GLE1Q53GS7 698 aaKnown RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 CCDC129Q6ZRS4 1044 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 ARMC9Q7Z3E5 817 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 IFT81Q8WYA0 676 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 CAVIN3Q969G5 261 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 EDC3Q96F86 508 aaKnown RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 EYA1Q99502 592 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 NUP88Q99567 741 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 HPSEQ9Y251 543 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 AXIN2Q9Y2T1 843 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 ASB3Q9Y575 518 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 EPN1Q9Y6I3 576 aaPredicted RBP11.8□□□□□ -0.52
CAPN3-203ENST00000349748 DUSP10Q9Y6W6 482 aa11.8□□□□□ -0.52
CAPN3-203ENST00000349748 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 CCT8L1PA6NM43 557 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 NUTM2BA6NNL0 878 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 NUTM2EB1AL46 878 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 NDUFA10O95299 355 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 GHRP10912 638 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 CARSP49589 748 aaKnown RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 ENOX2Q16206 610 aaKnown RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 STOX1Q6ZVD7 989 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 RAPGEF5Q92565 580 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 ARHGEF1Q92888 912 aaKnown RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 BOLA2Q9H3K6 86 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 GALNT8Q9NY28 637 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 STIM2Q9P246 746 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 ANKIB1Q9P2G1 1089 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 AGAP1Q9UPQ3 857 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 GOLGA6L10A6NI86 522 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 ZNF189O75820 626 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 CYP21A2P08686 494 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 ALDH5A1P51649 535 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 RINLQ6ZS11 566 aa11.79□□□□□ -0.52
CAPN3-203ENST00000349748 PROCA1Q8NCQ7 364 aaPredicted RBP11.79□□□□□ -0.52
CAPN3-203ENST00000349748 PRDM11Q9NQV5 511 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms