RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 SART3Q15020 963 aaKnown RBP25.86■■□□□ 1.73
SNX3-202ENST00000349379 OLFML2BQ68BL8 750 aa25.86■■□□□ 1.73
SNX3-202ENST00000349379 DPP9Q86TI2 863 aa25.86■■□□□ 1.73
SNX3-202ENST00000349379 KCNB2Q92953 911 aa25.86■■□□□ 1.73
SNX3-202ENST00000349379 AGBL1Q96MI9 1066 aa25.86■■□□□ 1.73
SNX3-202ENST00000349379 FBXO40Q9UH90 709 aa25.86■■□□□ 1.73
SNX3-202ENST00000349379 RPTORQ8N122 1335 aa25.86■■□□□ 1.73
SNX3-202ENST00000349379 ERICH2A1L162 156 aa25.85■■□□□ 1.73
SNX3-202ENST00000349379 ICAM1P05362 532 aa25.85■■□□□ 1.73
SNX3-202ENST00000349379 GOLGA8HP0CJ92 632 aa25.85■■□□□ 1.73
SNX3-202ENST00000349379 SNAP25P60880 206 aa25.85■■□□□ 1.73
SNX3-202ENST00000349379 WTAPQ15007 396 aa25.85■■□□□ 1.73
SNX3-202ENST00000349379 TKFCQ3LXA3 575 aa25.85■■□□□ 1.73
SNX3-202ENST00000349379 RASEFQ8IZ41 740 aa25.85■■□□□ 1.73
SNX3-202ENST00000349379 SHISA4Q96DD7 197 aa25.85■■□□□ 1.73
SNX3-202ENST00000349379 DIS3Q9Y2L1 958 aaKnown RBP25.85■■□□□ 1.73
SNX3-202ENST00000349379 DNAJC25-GNG10A0A024R161 153 aa25.84■■□□□ 1.73
SNX3-202ENST00000349379 EPB41L2O43491 1005 aaKnown RBP25.84■■□□□ 1.73
SNX3-202ENST00000349379 PRKAR2AP13861 404 aaKnown RBP25.84■■□□□ 1.73
SNX3-202ENST00000349379 EN2P19622 333 aaPredicted RBP25.84■■□□□ 1.73
SNX3-202ENST00000349379 MCM5P33992 734 aa25.84■■□□□ 1.73
SNX3-202ENST00000349379 GJA8P48165 433 aa25.84■■□□□ 1.73
SNX3-202ENST00000349379 CACNB2Q08289 660 aaPredicted RBP25.84■■□□□ 1.73
SNX3-202ENST00000349379 ZNF792Q3KQV3 632 aa25.84■■□□□ 1.73
SNX3-202ENST00000349379 TMEM67Q5HYA8 995 aa25.84■■□□□ 1.73
SNX3-202ENST00000349379 CCDC174Q6PII3 467 aa25.84■■□□□ 1.73
SNX3-202ENST00000349379 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.84■■□□□ 1.73
SNX3-202ENST00000349379 LY9Q9HBG7 655 aa25.84■■□□□ 1.73
SNX3-202ENST00000349379 SLC5A4Q9NY91 659 aa25.84■■□□□ 1.73
SNX3-202ENST00000349379 BAZ2BQ9UIF8 2168 aaKnown RBP25.83■■□□□ 1.73
SNX3-202ENST00000349379 PRC1O43663 620 aa25.83■■□□□ 1.73
SNX3-202ENST00000349379 REC8O95072 547 aa25.83■■□□□ 1.73
SNX3-202ENST00000349379 PARP1P09874 1014 aaKnown RBP25.83■■□□□ 1.73
SNX3-202ENST00000349379 HSPA4P34932 840 aa25.83■■□□□ 1.73
SNX3-202ENST00000349379 TROAPQ12815 778 aa25.83■■□□□ 1.73
SNX3-202ENST00000349379 MAML3Q96JK9 1138 aa25.83■■□□□ 1.73
SNX3-202ENST00000349379 TMEM87BQ96K49 555 aa25.83■■□□□ 1.73
SNX3-202ENST00000349379 HMX1Q9NP08 348 aaPredicted RBP25.83■■□□□ 1.73
SNX3-202ENST00000349379 RNF146Q9NTX7 359 aa25.83■■□□□ 1.73
SNX3-202ENST00000349379 WDR19Q8NEZ3 1342 aa25.83■■□□□ 1.73
SNX3-202ENST00000349379 PGK2P07205 417 aa25.82■■□□□ 1.72
SNX3-202ENST00000349379 U2AF1L4Q8WU68 220 aaKnown RBP25.82■■□□□ 1.72
SNX3-202ENST00000349379 UBA5Q9GZZ9 404 aa25.82■■□□□ 1.72
SNX3-202ENST00000349379 CPVLQ9H3G5 476 aa25.82■■□□□ 1.72
SNX3-202ENST00000349379 ACAD9Q9H845 621 aa25.82■■□□□ 1.72
SNX3-202ENST00000349379 PALM3A6NDB9 673 aaPredicted RBP25.81■■□□□ 1.72
SNX3-202ENST00000349379 SH2B2O14492 632 aaPredicted RBP25.81■■□□□ 1.72
SNX3-202ENST00000349379 SGPL1O95470 568 aa25.81■■□□□ 1.72
SNX3-202ENST00000349379 SLC4A3P48751 1232 aa25.81■■□□□ 1.72
SNX3-202ENST00000349379 GRM4Q14833 912 aa25.81■■□□□ 1.72
SNX3-202ENST00000349379 MFSD14CQ5VZR4 134 aa25.81■■□□□ 1.72
SNX3-202ENST00000349379 STAG2Q8N3U4 1231 aa25.81■■□□□ 1.72
SNX3-202ENST00000349379 NEK1Q96PY6 1258 aa25.81■■□□□ 1.72
SNX3-202ENST00000349379 GPHNQ9NQX3 736 aaPredicted RBP25.81■■□□□ 1.72
SNX3-202ENST00000349379 MAD2L2Q9UI95 211 aa25.81■■□□□ 1.72
SNX3-202ENST00000349379 CCPG1Q9ULG6 757 aa25.81■■□□□ 1.72
SNX3-202ENST00000349379 ALAS1P13196 640 aa25.8■■□□□ 1.72
SNX3-202ENST00000349379 CYP2C19P33261 490 aa25.8■■□□□ 1.72
SNX3-202ENST00000349379 ADCK5Q3MIX3 580 aa25.8■■□□□ 1.72
SNX3-202ENST00000349379 TRERF1Q96PN7 1200 aa25.8■■□□□ 1.72
SNX3-202ENST00000349379 CRISPLD2Q9H0B8 497 aa25.8■■□□□ 1.72
SNX3-202ENST00000349379 HOMER2Q9NSB8 354 aa25.8■■□□□ 1.72
SNX3-202ENST00000349379 PNMA2Q9UL42 364 aa25.8■■□□□ 1.72
SNX3-202ENST00000349379 TAL1P17542 331 aaPredicted RBP25.79■■□□□ 1.72
SNX3-202ENST00000349379 CAPN2P17655 700 aa25.79■■□□□ 1.72
SNX3-202ENST00000349379 LIFRP42702 1097 aa25.79■■□□□ 1.72
SNX3-202ENST00000349379 KRT32Q14532 448 aa25.79■■□□□ 1.72
SNX3-202ENST00000349379 MUM1L1Q5H9M0 696 aa25.79■■□□□ 1.72
SNX3-202ENST00000349379 ADGRF4Q8IZF3 695 aa25.79■■□□□ 1.72
SNX3-202ENST00000349379 FGD4Q96M96 766 aa25.79■■□□□ 1.72
SNX3-202ENST00000349379 DEFB118Q96PH6 123 aa25.79■■□□□ 1.72
SNX3-202ENST00000349379 MAP3K14Q99558 947 aa25.79■■□□□ 1.72
SNX3-202ENST00000349379 A1CFQ9NQ94 594 aaKnown RBP25.79■■□□□ 1.72
SNX3-202ENST00000349379 LRRC37A2A6NM11 1700 aa25.78■■□□□ 1.72
SNX3-202ENST00000349379 CYBAP13498 195 aa25.78■■□□□ 1.72
SNX3-202ENST00000349379 CCND3P30281 292 aaPredicted RBP25.78■■□□□ 1.72
SNX3-202ENST00000349379 EXOSC10Q01780 885 aaKnown RBP25.78■■□□□ 1.72
SNX3-202ENST00000349379 MLLT1Q03111 559 aaPredicted RBP25.78■■□□□ 1.72
SNX3-202ENST00000349379 ANKRD35Q8N283 1001 aa25.78■■□□□ 1.72
SNX3-202ENST00000349379 TMTC2Q8N394 836 aa25.78■■□□□ 1.72
SNX3-202ENST00000349379 MTMR8Q96EF0 704 aa25.78■■□□□ 1.72
SNX3-202ENST00000349379 DDX11Q96FC9 970 aa25.78■■□□□ 1.72
SNX3-202ENST00000349379 KLRF2D3W0D1 207 aa25.77■■□□□ 1.72
SNX3-202ENST00000349379 DDAH1O94760 285 aa25.77■■□□□ 1.72
SNX3-202ENST00000349379 CDC37Q16543 378 aaPredicted RBP25.77■■□□□ 1.72
SNX3-202ENST00000349379 CATIPQ7Z7H3 387 aa25.77■■□□□ 1.72
SNX3-202ENST00000349379 ZNF467Q7Z7K2 595 aaPredicted RBP25.77■■□□□ 1.72
SNX3-202ENST00000349379 ZNF654Q8IZM8 581 aa25.77■■□□□ 1.72
SNX3-202ENST00000349379 MSL3Q8N5Y2 521 aaKnown RBP25.77■■□□□ 1.72
SNX3-202ENST00000349379 FAM133AQ8N9E0 248 aa25.77■■□□□ 1.72
SNX3-202ENST00000349379 TRPV1Q8NER1 839 aa25.77■■□□□ 1.72
SNX3-202ENST00000349379 JMJD4Q9H9V9 463 aa25.77■■□□□ 1.72
SNX3-202ENST00000349379 SNX14Q9Y5W7 946 aa25.77■■□□□ 1.72
SNX3-202ENST00000349379 SLC35G1Q2M3R5 365 aa25.76■■□□□ 1.71
SNX3-202ENST00000349379 MAMDC4Q6UXC1 1216 aa25.76■■□□□ 1.71
SNX3-202ENST00000349379 DHX32Q7L7V1 743 aaKnown RBP25.76■■□□□ 1.71
SNX3-202ENST00000349379 SGMS1Q86VZ5 419 aa25.76■■□□□ 1.71
SNX3-202ENST00000349379 TINF2Q9BSI4 451 aa25.76■■□□□ 1.71
SNX3-202ENST00000349379 PFASO15067 1338 aa25.76■■□□□ 1.71
SNX3-202ENST00000349379 UBE2Q1Q7Z7E8 422 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 417 ms