RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 DCAF5Q96JK2 942 aa16.89■□□□□ 0.29
PTBP1-201ENST00000349038 TRIM47Q96LD4 638 aa16.89■□□□□ 0.29
PTBP1-201ENST00000349038 YIPF3Q9GZM5 350 aa16.89■□□□□ 0.29
PTBP1-201ENST00000349038 NUP188Q5SRE5 1749 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 GOLGA6L10A6NI86 522 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 TUBBP07437 444 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 HERVK_113P62684 666 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 SPA17Q15506 151 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 MSL1Q68DK7 614 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 TOM1L2Q6ZVM7 507 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 CPLX4Q7Z7G2 160 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 NLRP14Q86W24 1093 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 PARP9Q8IXQ6 854 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 ZC3H4Q9UPT8 1303 aaKnown RBP16.88■□□□□ 0.29
PTBP1-201ENST00000349038 GOLGA8KD6RF30 607 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 LGR5O75473 907 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 PAFAH1B1P43034 410 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 SLC4A8Q2Y0W8 1093 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 CYB5D1Q6P9G0 228 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 TBC1D10CQ8IV04 446 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 TEX11Q8IYF3 940 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 TRIM22Q8IYM9 498 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 CCDC42Q96M95 316 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 HAUS4Q9H6D7 363 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 CAPN6Q9Y6Q1 641 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 UBN2Q6ZU65 1347 aa16.88■□□□□ 0.29
PTBP1-201ENST00000349038 AKR1B10O60218 316 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 AP1G2O75843 785 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 VAV2P52735 878 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 PAGE5Q96GU1 130 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 FAM207AQ9NSI2 230 aaPredicted RBP16.87■□□□□ 0.29
PTBP1-201ENST00000349038 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
PTBP1-201ENST00000349038 MAP3K15Q6ZN16 1313 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 PHF20L1A8MW92 1017 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 GCFC2P16383 781 aaKnown RBP16.87■□□□□ 0.29
PTBP1-201ENST00000349038 SNX1Q13596 522 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 CUL4BQ13620 913 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 TRIM31Q9BZY9 425 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 CCDC113Q9H0I3 377 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 TPX2Q9ULW0 747 aaKnown RBP16.87■□□□□ 0.29
PTBP1-201ENST00000349038 FNTAP49354 379 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 EGFL6Q8IUX8 553 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 SPATA4Q8NEY3 305 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 NLRP2Q9NX02 1062 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 CEP126Q9P2H0 1117 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 FBXO2Q9UK22 296 aaPredicted RBP16.87■□□□□ 0.29
PTBP1-201ENST00000349038 SLC4A4Q9Y6R1 1079 aa16.87■□□□□ 0.29
PTBP1-201ENST00000349038 SH2B2O14492 632 aaPredicted RBP16.86■□□□□ 0.29
PTBP1-201ENST00000349038 CYP27B1O15528 508 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 MST1RQ04912 1400 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 FAM133BQ5BKY9 247 aaKnown RBP16.86■□□□□ 0.29
PTBP1-201ENST00000349038 TTLL7Q6ZT98 887 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 TBC1D1Q86TI0 1168 aaPredicted RBP16.86■□□□□ 0.29
PTBP1-201ENST00000349038 UHMK1Q8TAS1 419 aaKnown RBP16.86■□□□□ 0.29
PTBP1-201ENST00000349038 MCM8Q9UJA3 840 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 TLDC2A0PJX2 215 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 TUBB2AQ13885 445 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 TDRD12Q587J7 1177 aaKnown RBP16.86■□□□□ 0.29
PTBP1-201ENST00000349038 TAX1BP1Q86VP1 789 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 MYCBPAPQ8TBZ2 947 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 XAGE2Q96GT9 111 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 TUBB2BQ9BVA1 445 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 MAGEC2Q9UBF1 373 aaPredicted RBP16.86■□□□□ 0.29
PTBP1-201ENST00000349038 ABCC12Q96J65 1359 aa16.86■□□□□ 0.29
PTBP1-201ENST00000349038 ANKRD18BA2A2Z9 1011 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 PPP1R12AO14974 1030 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 PPP1R37O75864 691 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 MCM7P33993 719 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 APTXQ7Z2E3 356 aaKnown RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 STAMBPL1Q96FJ0 436 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 KRT12Q99456 494 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 RBM12Q9NTZ6 932 aaKnown RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 ACTN4O43707 911 aaKnown RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 HEXIM1O94992 359 aaKnown RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 PAK1Q13153 545 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 NT5DC1Q5TFE4 455 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 TRIM68Q6AZZ1 485 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 C2CD5Q86YS7 1000 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 FAXDC2Q96IV6 333 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 LBHD1Q9BQE6 289 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 ECM29Q5VYK3 1845 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 SHOX2O60902 331 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 PTPREP23469 700 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 MTIF2P46199 727 aaKnown RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 TBC1D8BQ0IIM8 1120 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 NTRK3Q16288 839 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 IQCEQ6IPM2 695 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 DDX42Q86XP3 938 aaKnown RBP eCLIP16.85■□□□□ 0.292e-6■□□□□ 10.6
PTBP1-201ENST00000349038 UBLCP1Q8WVY7 318 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 MMRN2Q9H8L6 949 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 NHEJ1Q9H9Q4 299 aaPredicted RBP16.85■□□□□ 0.29
PTBP1-201ENST00000349038 STK38LQ9Y2H1 464 aa16.85■□□□□ 0.29
PTBP1-201ENST00000349038 ERCC5P28715 1186 aaPredicted RBP16.84■□□□□ 0.29
PTBP1-201ENST00000349038 HLFQ16534 295 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 QPCTQ16769 361 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 PARD3BQ8TEW8 1205 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 DNM1LO00429 736 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 WNT7AO00755 349 aa16.84■□□□□ 0.29
PTBP1-201ENST00000349038 FTCDO95954 541 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms