RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 DESI2Q9BSY9 194 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 PLEKHA4Q9H4M7 779 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 RASGRF1Q13972 1273 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 DYNLL2Q96FJ2 89 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 KIAA1024Q9UPX6 916 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 AXIN2Q9Y2T1 843 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 PCDHA5Q9Y5H7 936 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 TTLL1O95922 423 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 GAS8O95995 478 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 ELF2Q15723 593 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 NUCKS1Q9H1E3 243 aaKnown RBP20.53■□□□□ 0.88
UBE3C-201ENST00000348165 SPC25Q9HBM1 224 aa20.53■□□□□ 0.88
UBE3C-201ENST00000348165 RPN1P04843 607 aaKnown RBP20.52■□□□□ 0.88
UBE3C-201ENST00000348165 GPT2Q8TD30 523 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 PGBD1Q96JS3 809 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 NACA2Q9H009 215 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 RTEL1Q9NZ71 1219 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 COL4A3BPQ9Y5P4 624 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 TUBB2AQ13885 445 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 ZNF772Q68DY9 489 aaPredicted RBP20.52■□□□□ 0.88
UBE3C-201ENST00000348165 ZNF526Q8TF50 670 aaPredicted RBP20.52■□□□□ 0.88
UBE3C-201ENST00000348165 GJA10Q969M2 543 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 TUBB2BQ9BVA1 445 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 PALLDQ8WX93 1383 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 SOS2Q07890 1332 aaPredicted RBP20.52■□□□□ 0.88
UBE3C-201ENST00000348165 FOSP01100 380 aaPredicted RBP20.52■□□□□ 0.88
UBE3C-201ENST00000348165 SLC5A4Q9NY91 659 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 TMC4Q7Z404 712 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 CCDC105Q8IYK2 499 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 MYRIPQ8NFW9 859 aa20.52■□□□□ 0.88
UBE3C-201ENST00000348165 COBLO75128 1261 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 LONP1P36776 959 aaKnown RBP20.51■□□□□ 0.87
UBE3C-201ENST00000348165 ZBTB8OSQ8IWT0 167 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 ZSWIM5Q9P217 1185 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 SNAP23O00161 211 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 DLATP10515 647 aaKnown RBP20.51■□□□□ 0.87
UBE3C-201ENST00000348165 CNGA1P29973 690 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 ADAM9Q13443 819 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 SLC39A14Q15043 492 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 IFT20Q8IY31 132 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 PIH1D3Q9NQM4 214 aaKnown RBP20.51■□□□□ 0.87
UBE3C-201ENST00000348165 SWAP70Q9UH65 585 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 CLASP1Q7Z460 1538 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 SPATA31A3Q5VYP0 1347 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 TSPOAP1O95153 1857 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 YARSP54577 528 aaKnown RBP20.51■□□□□ 0.87
UBE3C-201ENST00000348165 ASPRV1Q53RT3 343 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 SAMD15Q9P1V8 674 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
UBE3C-201ENST00000348165 PTPROQ16827 1216 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 KANSL2Q9H9L4 492 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 SYNMO15061 1565 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 CARMIL3Q8ND23 1372 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 LRRIQ4A6NIV6 560 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 NR5A1Q13285 461 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 PABPC4Q13310 644 aaKnown RBP eCLIP20.5■□□□□ 0.874e-7■■□□□ 13.9
UBE3C-201ENST00000348165 TRIM7Q9C029 511 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 H7C1W4 665 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 VIMP08670 466 aaKnown RBP20.5■□□□□ 0.87
UBE3C-201ENST00000348165 SARNPP82979 210 aaKnown RBP20.5■□□□□ 0.87
UBE3C-201ENST00000348165 CFAP221Q4G0U5 840 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 TRIML1Q8N9V2 468 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 PIGSQ96S52 555 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
UBE3C-201ENST00000348165 FMNL1O95466 1100 aaPredicted RBP20.5■□□□□ 0.87
UBE3C-201ENST00000348165 CFAP157Q5JU67 520 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 USP17L2Q6R6M4 530 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 KRT26Q7Z3Y9 468 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 SYCE1Q8N0S2 351 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 FTOQ9C0B1 505 aaKnown RBP eCLIP20.5■□□□□ 0.87
UBE3C-201ENST00000348165 ARAP3Q8WWN8 1544 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 KDM5CP41229 1560 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 IGBP1P78318 339 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 EPHA10Q5JZY3 1008 aa20.5■□□□□ 0.87
UBE3C-201ENST00000348165 FOXP1Q9H334 677 aaPredicted RBP20.5■□□□□ 0.87
UBE3C-201ENST00000348165 MMP10P09238 476 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 ARMCX5Q6P1M9 558 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 A0A1B0GUA9 196 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 PSMC4P43686 418 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 RBM6P78332 1123 aaKnown RBP20.49■□□□□ 0.87
UBE3C-201ENST00000348165 ODR4Q5SWX8 454 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 LRCH2Q5VUJ6 765 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 COA7Q96BR5 231 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 CPSF2Q9P2I0 782 aaKnown RBP20.49■□□□□ 0.87
UBE3C-201ENST00000348165 RABGAP1Q9Y3P9 1069 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 TTLL3Q9Y4R7 772 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 MECOMQ03112 1051 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 SPATA1Q5VX52 437 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 PCDHA4Q9UN74 947 aa20.49■□□□□ 0.87
UBE3C-201ENST00000348165 PLA2R1Q13018 1463 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 POLR2FP61218 127 aaKnown RBP20.48■□□□□ 0.87
UBE3C-201ENST00000348165 PPM1KQ8N3J5 372 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 IGKV5-2P06315 115 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 CDC25AP30304 524 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 POLGP54098 1239 aaPredicted RBP20.48■□□□□ 0.87
UBE3C-201ENST00000348165 GRAPQ13588 217 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 GRAPLQ8TC17 118 aaPredicted RBP20.48■□□□□ 0.87
UBE3C-201ENST00000348165 CCDC51Q96ER9 411 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 SYNE4Q8N205 404 aa20.48■□□□□ 0.87
UBE3C-201ENST00000348165 P4HA1P13674 534 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms