RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 IFIT3O14879 490 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 PGK2P07205 417 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 SLC16A2P36021 539 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 ASPRV1Q53RT3 343 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 NECAB2Q7Z6G3 386 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 MSL3Q8N5Y2 521 aaKnown RBP18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 ENAHQ8N8S7 591 aaPredicted RBP18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 DPF3Q92784 378 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 TRERF1Q96PN7 1200 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 RNF146Q9NTX7 359 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 FLRT1Q9NZU1 646 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 NRBP1Q9UHY1 535 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 RIPK3Q9Y572 518 aa18.45■□□□□ 0.54
TSPAN4-201ENST00000346501 DHX16O60231 1041 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 ICAM1P05362 532 aa18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 PARP1P09874 1014 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 CCND3P30281 292 aaPredicted RBP18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 TTBK2Q6IQ55 1244 aa18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 AGBL1Q96MI9 1066 aa18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 TINF2Q9BSI4 451 aa18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 DDX20Q9UHI6 824 aaKnown RBP18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 PFASO15067 1338 aa18.44■□□□□ 0.54
TSPAN4-201ENST00000346501 POTEB2H3BUK9 544 aa18.43■□□□□ 0.54
TSPAN4-201ENST00000346501 SNHG28P0DPA3 235 aa18.43■□□□□ 0.54
TSPAN4-201ENST00000346501 WTAPQ15007 396 aa18.43■□□□□ 0.54
TSPAN4-201ENST00000346501 ZNF792Q3KQV3 632 aa18.43■□□□□ 0.54
TSPAN4-201ENST00000346501 PRPF38BQ5VTL8 546 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-201ENST00000346501 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.43■□□□□ 0.545e-6■■■■■ 45.5
TSPAN4-201ENST00000346501 RANBP17Q9H2T7 1088 aaKnown RBP18.43■□□□□ 0.54
TSPAN4-201ENST00000346501 OGDHLQ9ULD0 1010 aa18.43■□□□□ 0.54
TSPAN4-201ENST00000346501 HTTP42858 3142 aa18.42■□□□□ 0.54
TSPAN4-201ENST00000346501 PDE4DIPQ5VU43 2346 aa18.42■□□□□ 0.54
TSPAN4-201ENST00000346501 CYBAP13498 195 aa18.42■□□□□ 0.54
TSPAN4-201ENST00000346501 RASGRP2Q7LDG7 609 aa18.42■□□□□ 0.54
TSPAN4-201ENST00000346501 ZNF467Q7Z7K2 595 aaPredicted RBP18.42■□□□□ 0.54
TSPAN4-201ENST00000346501 LSG1Q9H089 658 aaKnown RBP18.42■□□□□ 0.54
TSPAN4-201ENST00000346501 NR2E3Q9Y5X4 410 aa18.42■□□□□ 0.54
TSPAN4-201ENST00000346501 SEPT4O43236 478 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 GOLGA8HP0CJ92 632 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 SNAP25P60880 206 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 TMEM67Q5HYA8 995 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 NSMFQ6X4W1 530 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 CATIPQ7Z7H3 387 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 SKAP1Q86WV1 359 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 TMTC2Q8N394 836 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 ARRDC4Q8NCT1 418 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 PAWRQ96IZ0 340 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 MTA3Q9BTC8 594 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 ZNF536O15090 1300 aa18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 ZNFX1Q9P2E3 1918 aaKnown RBP18.41■□□□□ 0.54
TSPAN4-201ENST00000346501 MCM5P33992 734 aa18.4■□□□□ 0.54
TSPAN4-201ENST00000346501 TRAF1Q13077 416 aa18.4■□□□□ 0.54
TSPAN4-201ENST00000346501 CYB5R4Q7L1T6 521 aa18.4■□□□□ 0.54
TSPAN4-201ENST00000346501 MPHOSPH6Q99547 160 aaKnown RBP18.4■□□□□ 0.54
TSPAN4-201ENST00000346501 C11orf49Q9H6J7 331 aa18.4■□□□□ 0.54
TSPAN4-201ENST00000346501 SYNGAP1Q96PV0 1343 aa18.4■□□□□ 0.54
TSPAN4-201ENST00000346501 DNAJC25-GNG10A0A024R161 153 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 ASB14A6NK59 587 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 SLC27A2O14975 620 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 RARBP10826 455 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 SEC23AQ15436 765 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 CREB3L3Q68CJ9 461 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 LHX8Q68G74 356 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 UBA5Q9GZZ9 404 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 A1CFQ9NQ94 594 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 ADD3Q9UEY8 706 aaKnown RBP18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 WDR19Q8NEZ3 1342 aa18.39■□□□□ 0.53
TSPAN4-201ENST00000346501 B4DLN1 442 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 KBTBD13C9JR72 458 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 EVI5O60447 810 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 AKR1A1P14550 325 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 KRT32Q14532 448 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 MAMDC4Q6UXC1 1216 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 NFXL1Q6ZNB6 911 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 UBE2Q1Q7Z7E8 422 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 TMEM87BQ96K49 555 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 ABHD16BQ9H3Z7 469 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 ZHX1Q9UKY1 873 aaPredicted RBP18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 FAM184BQ9ULE4 1060 aa18.38■□□□□ 0.53
TSPAN4-201ENST00000346501 PTPDC1A2A3K4 754 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 CCDC69A6NI79 296 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 KLRF2D3W0D1 207 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 PRC1O43663 620 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 REC8O95072 547 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 IGHA2P01877 340 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 NECTIN1Q15223 517 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 CDC37Q16543 378 aaPredicted RBP18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 PRAMEF19Q5SWL8 479 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 CHST3Q7LGC8 479 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 ADGRF4Q8IZF3 695 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 VAT1LQ9HCJ6 419 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 CYP39A1Q9NYL5 469 aa18.37■□□□□ 0.53
TSPAN4-201ENST00000346501 ABCB11O95342 1321 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 KIF5BP33176 963 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 USH1GQ495M9 461 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 MUM1L1Q5H9M0 696 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 SYNE3Q6ZMZ3 975 aa18.36■□□□□ 0.53
TSPAN4-201ENST00000346501 STOX1Q6ZVD7 989 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms