RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 LIG3P49916 1009 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 KRT83P78385 493 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 CATIPQ7Z7H3 387 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 C8orf37Q96NL8 207 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 RTL9Q8NET4 1388 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 NUP98P52948 1817 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 NHEJ1Q9H9Q4 299 aaPredicted RBP19.91■□□□□ 0.78
VHL-202ENST00000345392 ABCA3Q99758 1704 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 ITGB4P16144 1822 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 PNPLA7Q6ZV29 1317 aa19.91■□□□□ 0.78
VHL-202ENST00000345392 TRIM21P19474 475 aaKnown RBP19.9■□□□□ 0.78
VHL-202ENST00000345392 EIF5P55010 431 aaKnown RBP19.9■□□□□ 0.78
VHL-202ENST00000345392 SND1Q7KZF4 910 aaKnown RBP eCLIP19.9■□□□□ 0.78
VHL-202ENST00000345392 ADSSL1Q8N142 457 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 RMND1Q9NWS8 449 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 SHOX2O60902 331 aaPredicted RBP19.9■□□□□ 0.78
VHL-202ENST00000345392 CYP7A1P22680 504 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 STAT6P42226 847 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 MATR3P43243 847 aaKnown RBP eCLIP19.9■□□□□ 0.78
VHL-202ENST00000345392 NLRP5P59047 1200 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 FKBP15Q5T1M5 1219 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 ZNF34Q8IZ26 560 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 ACSBG1Q96GR2 724 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 RPGRIP1Q96KN7 1286 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 TRIM47Q96LD4 638 aa19.9■□□□□ 0.78
VHL-202ENST00000345392 A0A087WUV0 522 aaPredicted RBP19.89■□□□□ 0.78
VHL-202ENST00000345392 TROAPQ12815 778 aa19.89■□□□□ 0.78
VHL-202ENST00000345392 MTA3Q9BTC8 594 aa19.89■□□□□ 0.78
VHL-202ENST00000345392 DMGDHQ9UI17 866 aaKnown RBP19.89■□□□□ 0.78
VHL-202ENST00000345392 TIAM2Q8IVF5 1701 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 PP2D1A8MPX8 630 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 SLC7A5Q01650 507 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 KRT26Q7Z3Y9 468 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 GPIHBP1Q8IV16 184 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 SRBD1Q8N5C6 995 aaKnown RBP19.89■□□□□ 0.77
VHL-202ENST00000345392 BCAS4Q8TDM0 211 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 PSMB7Q99436 277 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 LRRC1Q9BTT6 524 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 BCL9O00512 1426 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 A0A1W2PQC6 194 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 RASSF10A6NK89 507 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 CYLC1P35663 651 aaPredicted RBP19.89■□□□□ 0.77
VHL-202ENST00000345392 GYG1P46976 350 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 EHBP1Q8NDI1 1231 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 RASSF8Q8NHQ8 419 aa19.89■□□□□ 0.77
VHL-202ENST00000345392 PCMTD1Q96MG8 357 aaPredicted RBP19.89■□□□□ 0.77
VHL-202ENST00000345392 IPO7O95373 1038 aaKnown RBP19.88■□□□□ 0.77
VHL-202ENST00000345392 GUCY2CP25092 1073 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 PPP2R5BQ15173 497 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 MEA1Q16626 185 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 SLC4A8Q2Y0W8 1093 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 CAPS2Q9BXY5 557 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 SMARCAL1Q9NZC9 954 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 FAM184BQ9ULE4 1060 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 FAM169AQ9Y6X4 670 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 PDS5AQ29RF7 1337 aaKnown RBP19.88■□□□□ 0.77
VHL-202ENST00000345392 NMT2O60551 498 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 DYNLL1P63167 89 aaKnown RBP19.88■□□□□ 0.77
VHL-202ENST00000345392 AENQ8WTP8 325 aaKnown RBP19.88■□□□□ 0.77
VHL-202ENST00000345392 KAT2BQ92831 832 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 ZNHIT6Q9NWK9 470 aaKnown RBP19.88■□□□□ 0.77
VHL-202ENST00000345392 MAGEC2Q9UBF1 373 aaPredicted RBP19.88■□□□□ 0.77
VHL-202ENST00000345392 LRWD1Q9UFC0 647 aa19.88■□□□□ 0.77
VHL-202ENST00000345392 COL4A1P02462 1669 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 EBAG9O00559 213 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 PLEKP08567 350 aaPredicted RBP19.87■□□□□ 0.77
VHL-202ENST00000345392 TUBGCP2Q9BSJ2 902 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 MYH2Q9UKX2 1941 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 NKRFO15226 690 aaKnown RBP eCLIP19.87■□□□□ 0.77
VHL-202ENST00000345392 CPP00450 1065 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 EEF1GP26641 437 aaKnown RBP19.87■□□□□ 0.77
VHL-202ENST00000345392 GNGT1P63211 74 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 CHRNDQ07001 517 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 TBC1D8BQ0IIM8 1120 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 TMTC3Q6ZXV5 915 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 CREG2Q8IUH2 290 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 DEF6Q9H4E7 631 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 SAMM50Q9Y512 469 aa19.87■□□□□ 0.77
VHL-202ENST00000345392 ZNF263O14978 683 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 ERLIN2O94905 339 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 CXCR5P32302 372 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 DNM2P50570 870 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 NAALADL2Q58DX5 795 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 SECISBP2LQ93073 1101 aaKnown RBP19.86■□□□□ 0.77
VHL-202ENST00000345392 TTYH3Q9C0H2 523 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 EXOC1Q9NV70 894 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 EHD2Q9NZN4 543 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 SRGNP10124 158 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 KIF5AQ12840 1032 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 PPFIA1Q13136 1202 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 CCDC96Q2M329 555 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 RASGRP4Q8TDF6 673 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 NGLY1Q96IV0 654 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 RBM28Q9NW13 759 aaKnown RBP19.86■□□□□ 0.77
VHL-202ENST00000345392 CAPN6Q9Y6Q1 641 aa19.86■□□□□ 0.77
VHL-202ENST00000345392 CNTNAP5Q8WYK1 1306 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 IL6STP40189 918 aaPredicted RBP19.85■□□□□ 0.77
VHL-202ENST00000345392 SMIM5Q71RC9 77 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 IQCA1Q86XH1 822 aa19.85■□□□□ 0.77
VHL-202ENST00000345392 MLXIPQ9HAP2 919 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms