RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 KCND1Q9NSA2 647 aa14.59□□□□□ -0.07
CLK3-201ENST00000345005 SRPRBQ9Y5M8 271 aaKnown RBP14.59□□□□□ -0.07
CLK3-201ENST00000345005 FAM205CA6NFA0 338 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 FZD9O00144 591 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 ZNF202O95125 648 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 TNNT1P13805 278 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 PFKFB1P16118 471 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 NAPAP54920 295 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 RASSF7Q02833 373 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 CCDC96Q2M329 555 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 TTC38Q5R3I4 469 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 SHC4Q6S5L8 630 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 PIK3AP1Q6ZUJ8 805 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 LUZP1Q86V48 1076 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 HOMER1Q86YM7 354 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 NLGN2Q8NFZ4 835 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 TIGD1Q96MW7 591 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 SDF4Q9BRK5 362 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 NAT10Q9H0A0 1025 aaKnown RBP14.58□□□□□ -0.08
CLK3-201ENST00000345005 FBXO2Q9UK22 296 aaPredicted RBP14.58□□□□□ -0.08
CLK3-201ENST00000345005 SYNPO2Q9UMS6 1093 aa14.58□□□□□ -0.08
CLK3-201ENST00000345005 CCDC194A0A1B0GVG4 234 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 M0R2N6 131 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 GDF11O95390 407 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 GH2P01242 217 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 SYKP43405 635 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 GABPB1Q06547 395 aaPredicted RBP14.57□□□□□ -0.08
CLK3-201ENST00000345005 STX1AQ16623 288 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 NBPF9Q3BBW0 867 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 TYW1BQ6NUM6 668 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 SIAH1Q8IUQ4 282 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 CLIC6Q96NY7 704 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 SBF1O95248 1867 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 PNMA6FA0A0J9YX94 578 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 ESYT2A0FGR8 921 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 SMCO2A6NFE2 343 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 GSDMDP57764 484 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 CBX1P83916 185 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 TPD52L1Q16890 204 aaPredicted RBP14.57□□□□□ -0.08
CLK3-201ENST00000345005 SLFN13Q68D06 897 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 ADGRF4Q8IZF3 695 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 GMCL1P1Q8NEA9 526 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 FERMT2Q96AC1 680 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 PCDHA6Q9UN73 950 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 HPSEQ9Y251 543 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 PCDHA8Q9Y5H6 950 aa14.57□□□□□ -0.08
CLK3-201ENST00000345005 ATAD5Q96QE3 1844 aa14.56□□□□□ -0.08
CLK3-201ENST00000345005 SLC1A4P43007 532 aa14.56□□□□□ -0.08
CLK3-201ENST00000345005 GMPSP49915 693 aaPredicted RBP14.56□□□□□ -0.08
CLK3-201ENST00000345005 TNFAIP1Q13829 316 aa14.56□□□□□ -0.08
CLK3-201ENST00000345005 ZNF174Q15697 407 aa14.56□□□□□ -0.08
CLK3-201ENST00000345005 SHROOM1Q2M3G4 852 aaPredicted RBP14.56□□□□□ -0.08
CLK3-201ENST00000345005 NOM1Q5C9Z4 860 aaKnown RBP14.56□□□□□ -0.08
CLK3-201ENST00000345005 TMEM39BQ9GZU3 492 aa14.56□□□□□ -0.08
CLK3-201ENST00000345005 JMJD4Q9H9V9 463 aa14.56□□□□□ -0.08
CLK3-201ENST00000345005 ANO10Q9NW15 660 aa14.56□□□□□ -0.08
CLK3-201ENST00000345005 NRDCO43847 1150 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 TTBK2Q6IQ55 1244 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 PPP1R18Q6NYC8 613 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 KCTD1Q719H9 257 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 KRT25Q7Z3Z0 450 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 MTMR8Q96EF0 704 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 ARHGEF10LQ9HCE6 1279 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 CNOT7Q9UIV1 285 aaKnown RBP14.55□□□□□ -0.08
CLK3-201ENST00000345005 KCNH3Q9ULD8 1083 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 GJA3Q9Y6H8 435 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 A0A0U1RQG5 324 aaPredicted RBP14.55□□□□□ -0.08
CLK3-201ENST00000345005 SHTN1A0MZ66 631 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 F5H6K3 240 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 ADAMTS3O15072 1205 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 RAD21O60216 631 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 PRELPP51888 382 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 ATP2C1P98194 919 aaPredicted RBP14.55□□□□□ -0.08
CLK3-201ENST00000345005 MAP3K10Q02779 954 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 KLRC3Q07444 240 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 RRP1BQ14684 758 aaKnown RBP14.55□□□□□ -0.08
CLK3-201ENST00000345005 CREBRFQ8IUR6 639 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 MICALL2Q8IY33 904 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 GMCL1Q96IK5 515 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 IMPACTQ9P2X3 320 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 PGAP2Q9UHJ9 254 aa14.55□□□□□ -0.08
CLK3-201ENST00000345005 BECN2A8MW95 431 aa14.54□□□□□ -0.08
CLK3-201ENST00000345005 ZBTB5O15062 677 aa14.54□□□□□ -0.08
CLK3-201ENST00000345005 JAG1P78504 1218 aa14.54□□□□□ -0.08
CLK3-201ENST00000345005 PTGDRQ13258 359 aa14.54□□□□□ -0.08
CLK3-201ENST00000345005 CEP135Q66GS9 1140 aa14.54□□□□□ -0.08
CLK3-201ENST00000345005 LRRC8AQ8IWT6 810 aa14.54□□□□□ -0.08
CLK3-201ENST00000345005 SLC16A2P36021 539 aa14.53□□□□□ -0.08
CLK3-201ENST00000345005 NCBP1Q09161 790 aaKnown RBP14.53□□□□□ -0.08
CLK3-201ENST00000345005 RASA3Q14644 834 aa14.53□□□□□ -0.08
CLK3-201ENST00000345005 ARL6IP4Q66PJ3 421 aaKnown RBP14.53□□□□□ -0.08
CLK3-201ENST00000345005 ARHGAP27Q6ZUM4 889 aa14.53□□□□□ -0.08
CLK3-201ENST00000345005 ELOA2Q8IYF1 753 aaPredicted RBP14.53□□□□□ -0.08
CLK3-201ENST00000345005 RASGRP4Q8TDF6 673 aa14.53□□□□□ -0.08
CLK3-201ENST00000345005 KIAA1468Q9P260 1216 aa14.53□□□□□ -0.08
CLK3-201ENST00000345005 HOOK1Q9UJC3 728 aaKnown RBP14.53□□□□□ -0.08
CLK3-201ENST00000345005 USP17L10C9JJH3 530 aa14.52□□□□□ -0.08
CLK3-201ENST00000345005 H7C1D1 291 aa14.52□□□□□ -0.08
CLK3-201ENST00000345005 NDUFB10O96000 172 aa14.52□□□□□ -0.08
CLK3-201ENST00000345005 MCM7P33993 719 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms