RNA–Protein interactions for RNA: ENST00000344425.7

KCNQ2-201, Transcript of potassium voltage-gated channel subfamily Q member 2, humanhuman

TSL 1 (best) BASIC

Gene KCNQ2, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ2-201ENST00000344425 EPHB4P54760 987 aa23.84■■□□□ 1.41
KCNQ2-201ENST00000344425 SLFN13Q68D06 897 aa23.84■■□□□ 1.41
KCNQ2-201ENST00000344425 LRRC47Q8N1G4 583 aaKnown RBP23.84■■□□□ 1.41
KCNQ2-201ENST00000344425 NEDD1Q8NHV4 660 aa23.84■■□□□ 1.41
KCNQ2-201ENST00000344425 ERC2O15083 957 aa23.83■■□□□ 1.4
KCNQ2-201ENST00000344425 TIMP1P01033 207 aa23.83■■□□□ 1.4
KCNQ2-201ENST00000344425 CCDC144BQ3MJ40 725 aa23.83■■□□□ 1.4
KCNQ2-201ENST00000344425 MYLIPQ8WY64 445 aa23.83■■□□□ 1.4
KCNQ2-201ENST00000344425 VTI1AQ96AJ9 217 aa23.83■■□□□ 1.4
KCNQ2-201ENST00000344425 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.82■■□□□ 1.4
KCNQ2-201ENST00000344425 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.82■■□□□ 1.4
KCNQ2-201ENST00000344425 GJA9P57773 515 aa23.82■■□□□ 1.4
KCNQ2-201ENST00000344425 PPP4R3BQ5MIZ7 849 aa23.82■■□□□ 1.4
KCNQ2-201ENST00000344425 ARMCX2Q7L311 632 aa23.82■■□□□ 1.4
KCNQ2-201ENST00000344425 CHURC1Q8WUH1 139 aa23.82■■□□□ 1.4
KCNQ2-201ENST00000344425 ISY1Q9ULR0 285 aaKnown RBP23.82■■□□□ 1.4
KCNQ2-201ENST00000344425 TTC41PQ6P2S7 1318 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 PLIN4Q96Q06 1357 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 MYADML2A6NDP7 307 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 TMEM232C9JQI7 657 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 ASGR1P07306 291 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 FOSL2P15408 326 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 STAT2P52630 851 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 CCDC174Q6PII3 467 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 FAM160B2Q86V87 743 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 NAPBQ9H115 298 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 UPF3AQ9H1J1 476 aaKnown RBP23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 ACAD9Q9H845 621 aa23.81■■□□□ 1.4
KCNQ2-201ENST00000344425 TFAP4Q01664 338 aa23.8■■□□□ 1.4
KCNQ2-201ENST00000344425 GNASQ5JWF2 1037 aa23.8■■□□□ 1.4
KCNQ2-201ENST00000344425 FGD4Q96M96 766 aa23.8■■□□□ 1.4
KCNQ2-201ENST00000344425 HOMER2Q9NSB8 354 aa23.8■■□□□ 1.4
KCNQ2-201ENST00000344425 TBX21Q9UL17 535 aa23.8■■□□□ 1.4
KCNQ2-201ENST00000344425 MYH4Q9Y623 1939 aa23.8■■□□□ 1.4
KCNQ2-201ENST00000344425 A0A0U1RQG5 324 aaPredicted RBP23.79■■□□□ 1.4
KCNQ2-201ENST00000344425 CDK7P50613 346 aa23.79■■□□□ 1.4
KCNQ2-201ENST00000344425 IKQ13123 557 aaPredicted RBP23.79■■□□□ 1.4
KCNQ2-201ENST00000344425 MFSD5Q6N075 450 aa23.79■■□□□ 1.4
KCNQ2-201ENST00000344425 CCDC144CPQ8IYA2 1237 aa23.79■■□□□ 1.4
KCNQ2-201ENST00000344425 ARVCFO00192 962 aa23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 TLR3O15455 904 aaKnown RBP23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 SLC1A4P43007 532 aa23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 PPARAQ07869 468 aa23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 PPIGQ13427 754 aaKnown RBP eCLIP23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 TKFCQ3LXA3 575 aa23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 STAG1Q8WVM7 1258 aa23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 GMCL1Q96IK5 515 aa23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 SEC62Q99442 399 aaKnown RBP23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 FSD1Q9BTV5 496 aa23.78■■□□□ 1.4
KCNQ2-201ENST00000344425 ASB14A6NK59 587 aa23.77■■□□□ 1.4
KCNQ2-201ENST00000344425 ADCY6O43306 1168 aa23.77■■□□□ 1.4
KCNQ2-201ENST00000344425 FAM133AQ8N9E0 248 aa23.77■■□□□ 1.4
KCNQ2-201ENST00000344425 DNAJB2P25686 324 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 IRX5P78411 483 aaPredicted RBP23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 CNTN2Q02246 1040 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 ZMYM1Q5SVZ6 1142 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 NOL8Q76FK4 1167 aaKnown RBP23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 TMEM199Q8N511 208 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 RNF146Q9NTX7 359 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 PLA2G6O60733 806 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 MCCP23508 829 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 NKX3-2P78367 333 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 TNFAIP2Q03169 654 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 PI4K2BQ8TCG2 481 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 AGBL1Q96MI9 1066 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 KATNBL1Q9H079 304 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 A1CFQ9NQ94 594 aaKnown RBP23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 STX8Q9UNK0 236 aa23.76■■□□□ 1.39
KCNQ2-201ENST00000344425 TSPY2A6NKD2 308 aa23.75■■□□□ 1.39
KCNQ2-201ENST00000344425 TRERF1Q96PN7 1200 aa23.75■■□□□ 1.39
KCNQ2-201ENST00000344425 EYSQ5T1H1 3165 aa23.74■■□□□ 1.39
KCNQ2-201ENST00000344425 CABYRO75952 493 aa23.74■■□□□ 1.39
KCNQ2-201ENST00000344425 ALAS1P13196 640 aa23.74■■□□□ 1.39
KCNQ2-201ENST00000344425 RCSD1Q6JBY9 416 aa23.74■■□□□ 1.39
KCNQ2-201ENST00000344425 FAM126BQ8IXS8 530 aa23.74■■□□□ 1.39
KCNQ2-201ENST00000344425 TIFAQ96CG3 184 aa23.74■■□□□ 1.39
KCNQ2-201ENST00000344425 ZNF576Q9H609 170 aa23.74■■□□□ 1.39
KCNQ2-201ENST00000344425 ZNF536O15090 1300 aa23.74■■□□□ 1.39
KCNQ2-201ENST00000344425 GRIN2CQ14957 1233 aa23.73■■□□□ 1.39
KCNQ2-201ENST00000344425 TMEM240Q5SV17 173 aa23.73■■□□□ 1.39
KCNQ2-201ENST00000344425 CCDC129Q6ZRS4 1044 aa23.73■■□□□ 1.39
KCNQ2-201ENST00000344425 AP5M1Q9H0R1 490 aa23.73■■□□□ 1.39
KCNQ2-201ENST00000344425 SOWAHBA6NEL2 793 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 CTAGE5O15320 804 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 ZEB2O60315 1214 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 CSF2RAP15509 400 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 BEX3Q00994 111 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 PSRC1Q6PGN9 363 aaPredicted RBP23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 KCTD1Q719H9 257 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 CHMP4CQ96CF2 233 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 SEZ6LQ9BYH1 1024 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 PPP1R12CQ9BZL4 782 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 CDH23Q9H251 3354 aa23.72■■□□□ 1.39
KCNQ2-201ENST00000344425 MCM3APO60318 1980 aa23.71■■□□□ 1.39
KCNQ2-201ENST00000344425 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.71■■□□□ 1.39
KCNQ2-201ENST00000344425 MX1P20591 662 aa23.71■■□□□ 1.39
KCNQ2-201ENST00000344425 C16orf59Q7L2K0 433 aa23.71■■□□□ 1.39
KCNQ2-201ENST00000344425 TLK2Q86UE8 772 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms