RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 SMCO2A6NFE2 343 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 M0R2N6 131 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 PTMSP20962 102 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 GNA11P29992 359 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 SNAP25P60880 206 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 KIFC2Q96AC6 838 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 AMNQ9BXJ7 453 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 RPAP3Q9H6T3 665 aaPredicted RBP18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 C6orf50Q9HD87 102 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 RLFQ13129 1914 aa18.76■□□□□ 0.59
CEACAM1-202ENST00000344391 FKBP1BP68106 108 aa18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 NBR1Q14596 966 aa18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 CHADLQ6NUI6 762 aa18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 FBXO11Q86XK2 927 aa18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 PRPF38AQ8NAV1 312 aaKnown RBP18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 SLF1Q9BQI6 1058 aa18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 TMOD4Q9NZQ9 345 aa18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 PCDHA1Q9Y5I3 950 aa18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 SMCHD1A6NHR9 2005 aa18.75■□□□□ 0.59
CEACAM1-202ENST00000344391 ITGBL1O95965 494 aaPredicted RBP18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 CSPP1Q1MSJ5 1256 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 EARS2Q5JPH6 523 aaKnown RBP18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 LEO1Q8WVC0 666 aaPredicted RBP18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 OTUD5Q96G74 571 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 FTOQ9C0B1 505 aaKnown RBP eCLIP18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 TANGO6Q9C0B7 1094 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 RTEL1Q9NZ71 1219 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 ELP1O95163 1332 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 TRPM7Q96QT4 1865 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 CXCL11O14625 94 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 IRF6O14896 467 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 TOB1P50616 345 aaPredicted RBP18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 PPIL2Q13356 520 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 RILPL1Q5EBL4 403 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 SPATA32Q96LK8 384 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 GBA2Q9HCG7 927 aaPredicted RBP18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 POLR3EQ9NVU0 708 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 RCOR1Q9UKL0 485 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 PPP1R9AQ9ULJ8 1098 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 PCDHA6Q9UN73 950 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 PCDHA8Q9Y5H6 950 aa18.74■□□□□ 0.59
CEACAM1-202ENST00000344391 LOC285556D6RIA3 1793 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 FAM205CA6NFA0 338 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 FLOT1O75955 427 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 ADCY7P51828 1080 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 CEBPZQ03701 1054 aaKnown RBP18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 TRAF1Q13077 416 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 NOM1Q5C9Z4 860 aaKnown RBP18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 BICD2Q8TD16 824 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 RIC8AQ9NPQ8 531 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 KCNH4Q9UQ05 1017 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 CLIC4Q9Y696 253 aa18.73■□□□□ 0.59
CEACAM1-202ENST00000344391 CELF2O95319 508 aaKnown RBP18.72■□□□□ 0.59
CEACAM1-202ENST00000344391 NASPP49321 788 aaPredicted RBP18.72■□□□□ 0.59
CEACAM1-202ENST00000344391 ANO1Q5XXA6 986 aa18.72■□□□□ 0.59
CEACAM1-202ENST00000344391 CATSPERGQ6ZRH7 1159 aa18.72■□□□□ 0.59
CEACAM1-202ENST00000344391 RASGRP4Q8TDF6 673 aa18.72■□□□□ 0.59
CEACAM1-202ENST00000344391 OPTNQ96CV9 577 aa18.72■□□□□ 0.59
CEACAM1-202ENST00000344391 A0A0G2JLL6 359 aaPredicted RBP18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 USH1GQ495M9 461 aa18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 CCDC174Q6PII3 467 aa18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 SAMD1Q6SPF0 538 aaPredicted RBP18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 PIK3AP1Q6ZUJ8 805 aa18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 PRRT2Q7Z6L0 340 aaPredicted RBP18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 C2orf69Q8N8R5 385 aa18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 SLC10A4Q96EP9 437 aa18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 GLT8D2Q9H1C3 349 aa18.71■□□□□ 0.59
CEACAM1-202ENST00000344391 USP17L15C9J2P7 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 USP17L13C9JLJ4 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 USP17L11C9JVI0 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 USP17L18D6R9N7 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 USP17L22D6RA61 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 USP17L17D6RBQ6 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 USP17L19D6RCP7 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 USP17L20D6RJB6 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 GADD45BO75293 160 aaPredicted RBP18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 YEATS4O95619 227 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 FDX1P10109 184 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 MRPL12P52815 198 aaKnown RBP18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 USP17L24Q0WX57 530 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 REXO1Q8N1G1 1221 aaKnown RBP18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 LINC00301Q8NCQ3 95 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 PROCA1Q8NCQ7 364 aaPredicted RBP18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 CUL5Q93034 780 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 PSTPIP2Q9H939 334 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 SLC38A10Q9HBR0 1119 aa18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 NOL7Q9UMY1 257 aaKnown RBP18.71■□□□□ 0.58
CEACAM1-202ENST00000344391 ZNF536O15090 1300 aa18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 CCDC194A0A1B0GVG4 234 aa18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 DSG3P32926 999 aa18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 TRAPPC10P48553 1259 aa18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 COG2Q14746 738 aa18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 SF3A1Q15459 793 aaKnown RBP18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 CST9Q5W186 159 aa18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 KRT25Q7Z3Z0 450 aa18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 GPBP1L1Q9HC44 474 aaPredicted RBP18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 BIN2Q9UBW5 565 aaPredicted RBP18.7■□□□□ 0.58
CEACAM1-202ENST00000344391 COL11A1P12107 1806 aaPredicted RBP18.69■□□□□ 0.58
CEACAM1-202ENST00000344391 TRAK2O60296 914 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms