RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 CCDC39Q9UFE4 941 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 PRKAG2Q9UGJ0 569 aa8.59□□□□□ -1.03
ZNF540-202ENST00000343599 TRIM75PA6NK02 468 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 SOX1O00570 391 aaPredicted RBP8.58□□□□□ -1.04
ZNF540-202ENST00000343599 ZNF445P59923 1031 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 LRRC26Q2I0M4 334 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 DNERQ8NFT8 737 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 MAFAQ8NHW3 353 aaPredicted RBP8.58□□□□□ -1.04
ZNF540-202ENST00000343599 INPP5BP32019 993 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 MECOMQ03112 1051 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.58□□□□□ -1.04
ZNF540-202ENST00000343599 CHMP4CQ96CF2 233 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 P2RX7Q99572 595 aaKnown RBP8.58□□□□□ -1.04
ZNF540-202ENST00000343599 PLVAPQ9BX97 442 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 ABHD16BQ9H3Z7 469 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 VCPKMTQ9H867 229 aa8.58□□□□□ -1.04
ZNF540-202ENST00000343599 ARVCFO00192 962 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 ACTN1P12814 892 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 PRKAR2AP13861 404 aaKnown RBP8.57□□□□□ -1.04
ZNF540-202ENST00000343599 MCCP23508 829 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 SMARCA1P28370 1054 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 MTFR1Q15390 333 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 DZIP1Q86YF9 867 aaKnown RBP8.57□□□□□ -1.04
ZNF540-202ENST00000343599 CDCA3Q99618 268 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-202ENST00000343599 ZHX2Q9Y6X8 837 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 PLXNA3P51805 1871 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 SPDYE16A6NNV3 312 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-202ENST00000343599 UBTFL1P0CB47 393 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-202ENST00000343599 EDNRBP24530 442 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 PAWRQ96IZ0 340 aaKnown RBP8.57□□□□□ -1.04
ZNF540-202ENST00000343599 MAML3Q96JK9 1138 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 GBP4Q96PP9 640 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 KANSL2Q9H9L4 492 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 FEZ2Q9UHY8 353 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-202ENST00000343599 CPA4Q9UI42 421 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 TNRC18O15417 2968 aaPredicted RBP8.57□□□□□ -1.04
ZNF540-202ENST00000343599 MCAMP43121 646 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 LRRC41Q15345 812 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 RTL10Q7L3V2 364 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 MAP3K14Q99558 947 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 CABP5Q9NP86 173 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 HMG20BQ9P0W2 317 aa8.57□□□□□ -1.04
ZNF540-202ENST00000343599 TCP10L2B9ZVM9 353 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 PATL2C9JE40 543 aaKnown RBP8.56□□□□□ -1.04
ZNF540-202ENST00000343599 MLLT3P42568 568 aaPredicted RBP8.56□□□□□ -1.04
ZNF540-202ENST00000343599 MAGEA9P43362 315 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 GYG1P46976 350 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 CCDC158Q5M9N0 1113 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 TMEM184AQ6ZMB5 413 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 FAM126BQ8IXS8 530 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 AFAP1L1Q8TED9 768 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 DEFB118Q96PH6 123 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 POP1Q99575 1024 aaKnown RBP8.56□□□□□ -1.04
ZNF540-202ENST00000343599 CDX2Q99626 313 aaPredicted RBP8.56□□□□□ -1.04
ZNF540-202ENST00000343599 RIOK1Q9BRS2 568 aaKnown RBP8.56□□□□□ -1.04
ZNF540-202ENST00000343599 SPATC1LQ9H0A9 340 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 UPF2Q9HAU5 1272 aaKnown RBP8.56□□□□□ -1.04
ZNF540-202ENST00000343599 IGSF5Q9NSI5 407 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 MSRAQ9UJ68 235 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 TLL1O43897 1013 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 GNAI2P04899 355 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 ALADP13716 330 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 ATF7P17544 494 aaPredicted RBP8.56□□□□□ -1.04
ZNF540-202ENST00000343599 RASGRF1Q13972 1273 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 EGFL6Q8IUX8 553 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 SH3TC2Q8TF17 1288 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 JARID2Q92833 1246 aaPredicted RBP8.56□□□□□ -1.04
ZNF540-202ENST00000343599 SERPINB13Q9UIV8 391 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 PPP1R9AQ9ULJ8 1098 aa8.56□□□□□ -1.04
ZNF540-202ENST00000343599 TCRBV5S4A2TA0A5A2 114 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 CLRN2A0PK11 232 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 A6NJR5 290 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 PRR29P0C7W0 189 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 NOP2P46087 812 aaKnown RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 UBE3AQ05086 875 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 EXOSC9Q06265 439 aaKnown RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 TERF2Q15554 542 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 CLEC17AQ6ZS10 378 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 CREBRFQ8IUR6 639 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 SMCR8Q8TEV9 937 aaPredicted RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 DCAF4Q8WV16 495 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 TNPO1Q92973 898 aaKnown RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 FAM122AQ96E09 287 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 GAS2L1Q99501 681 aaPredicted RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 RAD50Q92878 1312 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 U2AF2P26368 475 aaKnown RBP eCLIP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 FOSBP53539 338 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 TIGD5Q53EQ6 642 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 ERMP1Q7Z2K6 904 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 XAGE2Q96GT9 111 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 UPF3BQ9BZI7 483 aaKnown RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 HCN4Q9Y3Q4 1203 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 DDTLA6NHG4 134 aaPredicted RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 ANXA1P04083 346 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 HTRA4P83105 476 aaPredicted RBP8.55□□□□□ -1.04
ZNF540-202ENST00000343599 RAB3GAP1Q15042 981 aa8.55□□□□□ -1.04
ZNF540-202ENST00000343599 KLHL40Q2TBA0 621 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms