RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 HERC5Q9UII4 1024 aaKnown RBP16.65■□□□□ 0.26
PBX3-201ENST00000342287 PCDHA7Q9UN72 937 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 CYTH3O43739 400 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 CEP135Q66GS9 1140 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 LRRC47Q8N1G4 583 aaKnown RBP16.65■□□□□ 0.26
PBX3-201ENST00000342287 KANSL2Q9H9L4 492 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 MYOZ2Q9NPC6 264 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 SNHG28P0DPA3 235 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 NLRP5P59047 1200 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 ASPRV1Q53RT3 343 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 CLEC10AQ8IUN9 316 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 CCAR1Q8IX12 1150 aaKnown RBP16.64■□□□□ 0.25
PBX3-201ENST00000342287 VEZTQ9HBM0 779 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 DDX19AQ9NUU7 478 aaKnown RBP16.64■□□□□ 0.25
PBX3-201ENST00000342287 DACT1Q9NYF0 836 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 FZD9O00144 591 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 WNT10BO00744 389 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 SLC35G1Q2M3R5 365 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 NOM1Q5C9Z4 860 aaKnown RBP16.64■□□□□ 0.25
PBX3-201ENST00000342287 TMEM179Q6ZVK1 233 aa16.64■□□□□ 0.25
PBX3-201ENST00000342287 MYH6P13533 1939 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
PBX3-201ENST00000342287 PLA2G4AP47712 749 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 ZNF280AP59817 542 aaPredicted RBP16.63■□□□□ 0.25
PBX3-201ENST00000342287 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 ABCB5Q2M3G0 1257 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 RASGRP2Q7LDG7 609 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 FAM83AQ86UY5 434 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 JMYQ8N9B5 988 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 CABP5Q9NP86 173 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 NYAP2Q9P242 653 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 FHOD1Q9Y613 1164 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 MYH8P13535 1937 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 CNTNAP1P78357 1384 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 A0A1W2PQ27 194 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 A0A1W2PQ64 194 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 A0A1W2PQD8 194 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 CALML3P27482 149 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 GPS2Q13227 327 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 CCDC186Q7Z3E2 898 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 MKL1Q969V6 931 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
PBX3-201ENST00000342287 SIPA1L1O43166 1804 aa16.63■□□□□ 0.25
PBX3-201ENST00000342287 PPP6R2O75170 966 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 NR1I2O75469 434 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
PBX3-201ENST00000342287 PRELPP51888 382 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 TPM4P67936 248 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 PTPAQ15257 358 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 NPY5RQ15761 445 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 NBPF9Q3BBW0 867 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 RBM26Q5T8P6 1007 aaKnown RBP16.62■□□□□ 0.25
PBX3-201ENST00000342287 DRC7Q8IY82 874 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 FAM177A1Q8N128 213 aaPredicted RBP16.62■□□□□ 0.25
PBX3-201ENST00000342287 DPF2Q92785 391 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 RRP36Q96EU6 259 aaKnown RBP16.62■□□□□ 0.25
PBX3-201ENST00000342287 NUP62CLQ9H1M0 184 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.62■□□□□ 0.25
PBX3-201ENST00000342287 CCDC73Q6ZRK6 1079 aa16.62■□□□□ 0.25
PBX3-201ENST00000342287 EEF2P13639 858 aaKnown RBP16.61■□□□□ 0.25
PBX3-201ENST00000342287 RIOX1Q9H6W3 641 aa16.61■□□□□ 0.25
PBX3-201ENST00000342287 BARHL2Q9NY43 387 aa16.61■□□□□ 0.25
PBX3-201ENST00000342287 FRMPD2Q68DX3 1309 aaPredicted RBP16.61■□□□□ 0.25
PBX3-201ENST00000342287 PNMA6AP0CW24 399 aaPredicted RBP16.61■□□□□ 0.25
PBX3-201ENST00000342287 SEPT2Q15019 361 aa16.61■□□□□ 0.25
PBX3-201ENST00000342287 CCDC148Q8NFR7 591 aa16.61■□□□□ 0.25
PBX3-201ENST00000342287 MRPS27Q92552 414 aaKnown RBP16.61■□□□□ 0.25
PBX3-201ENST00000342287 GPKOWQ92917 476 aaPredicted RBP eCLIP16.61■□□□□ 0.25
PBX3-201ENST00000342287 CPVLQ9H3G5 476 aa16.61■□□□□ 0.25
PBX3-201ENST00000342287 ZCCHC17Q9NP64 241 aaKnown RBP16.61■□□□□ 0.25
PBX3-201ENST00000342287 SEC63Q9UGP8 760 aaKnown RBP16.61■□□□□ 0.25
PBX3-201ENST00000342287 SHTN1A0MZ66 631 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 KIF1CO43896 1103 aaKnown RBP16.6■□□□□ 0.25
PBX3-201ENST00000342287 GDF11O95390 407 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 ZNF543Q08ER8 600 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 GPATCH4Q5T3I0 446 aaKnown RBP16.6■□□□□ 0.25
PBX3-201ENST00000342287 WWC2Q6AWC2 1192 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 HEATR3Q7Z4Q2 680 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 FSIP1Q8NA03 581 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 TNFRSF25Q93038 417 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 ERO1AQ96HE7 468 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 UBA5Q9GZZ9 404 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 GJA3Q9Y6H8 435 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 GREB1LQ9C091 1923 aaPredicted RBP16.6■□□□□ 0.25
PBX3-201ENST00000342287 MARCKSP29966 332 aaPredicted RBP16.6■□□□□ 0.25
PBX3-201ENST00000342287 TNNI2P48788 182 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 GMPSP49915 693 aaPredicted RBP16.6■□□□□ 0.25
PBX3-201ENST00000342287 ICA1Q05084 483 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 TMEM39BQ9GZU3 492 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 TNMDQ9H2S6 317 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 GOLPH3LQ9H4A5 285 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 CLSTN2Q9H4D0 955 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 VAT1LQ9HCJ6 419 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 CEP131Q9UPN4 1083 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 CCDC189A1A4V9 331 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 TBC1D12O60347 775 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 FAM160A1Q05DH4 1040 aa16.6■□□□□ 0.25
PBX3-201ENST00000342287 SHROOM1Q2M3G4 852 aaPredicted RBP16.6■□□□□ 0.25
PBX3-201ENST00000342287 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms