RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 GTF3C2Q8WUA4 911 aaPredicted RBP12.17□□□□□ -0.46
TPM3-207ENST00000341372 DIAPH3Q9NSV4 1193 aa12.17□□□□□ -0.46
TPM3-207ENST00000341372 DNMT3AQ9Y6K1 912 aaPredicted RBP12.17□□□□□ -0.46
TPM3-207ENST00000341372 RAD50Q92878 1312 aa12.17□□□□□ -0.46
TPM3-207ENST00000341372 MINDY4BA8MYZ0 360 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 COL9A1P20849 921 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 HOXA7P31268 230 aaPredicted RBP12.16□□□□□ -0.46
TPM3-207ENST00000341372 DGKZQ13574 1117 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 CCDC136Q96JN2 1154 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 SEPT3Q9UH03 358 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 PNMA3Q9UL41 463 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.16□□□□□ -0.46
TPM3-207ENST00000341372 ZSWIM8A7E2V4 1837 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 LOC102724159A0A0B4J2E5 919 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 BCRP11274 1271 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 USP14P54578 494 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 SP3Q02447 781 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 PABPC4Q13310 644 aaKnown RBP eCLIP12.16□□□□□ -0.462e-26■■■□□ 15.7
TPM3-207ENST00000341372 PWP2Q15269 919 aaKnown RBP12.16□□□□□ -0.46
TPM3-207ENST00000341372 CWC27Q6UX04 472 aaKnown RBP12.16□□□□□ -0.46
TPM3-207ENST00000341372 SIAH1Q8IUQ4 282 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 TMEM87AQ8NBN3 555 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 ACER1Q8TDN7 264 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 ERO1AQ96HE7 468 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 ZNF287Q9HBT7 754 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 CAPN10Q9HC96 672 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 TMOD4Q9NZQ9 345 aa12.16□□□□□ -0.46
TPM3-207ENST00000341372 IGKV6D-41A0A0C4DH26 115 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 A0A1W2PRG0 241 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 MPHOSPH10O00566 681 aaKnown RBP12.15□□□□□ -0.46
TPM3-207ENST00000341372 DKK1O94907 266 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 FGRP09769 529 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 CYP2C8P10632 490 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 SLC43A3Q8NBI5 491 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 MGAMO43451 1857 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 PARP14Q460N5 1801 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 RLFQ13129 1914 aa12.15□□□□□ -0.46
TPM3-207ENST00000341372 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.47
TPM3-207ENST00000341372 FGAP02671 866 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 SLC3A2P08195 630 aaKnown RBP12.15□□□□□ -0.47
TPM3-207ENST00000341372 CAP1Q01518 475 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 ICA1Q05084 483 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 RNF135Q8IUD6 432 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 VTI1AQ96AJ9 217 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 FEZ1Q99689 392 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 DSCC1Q9BVC3 393 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 ASCC2Q9H1I8 757 aaPredicted RBP12.15□□□□□ -0.47
TPM3-207ENST00000341372 IL25Q9H293 177 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 KLHL42Q9P2K6 505 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 TMX2Q9Y320 296 aa12.15□□□□□ -0.47
TPM3-207ENST00000341372 MYH4Q9Y623 1939 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 A0A0G2JMZ2 1700 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 CHMLP26374 656 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 FANCCQ00597 558 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 PDE4BQ07343 736 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 PKN2Q16513 984 aaKnown RBP12.14□□□□□ -0.47
TPM3-207ENST00000341372 CLEC10AQ8IUN9 316 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 CD99L2Q8TCZ2 262 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 MCOLN1Q9GZU1 580 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 MKNK2Q9HBH9 465 aa12.14□□□□□ -0.47
TPM3-207ENST00000341372 ORC4O43929 436 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 VCAM1P19320 739 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 LACTBP83111 547 aaPredicted RBP12.13□□□□□ -0.47
TPM3-207ENST00000341372 BMP2KLQ5H9B9 411 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 PLPP7Q8NBV4 271 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 ACBD3Q9H3P7 528 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 RNF19AQ9NV58 838 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 CPA4Q9UI42 421 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 KIAA1024Q9UPX6 916 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
TPM3-207ENST00000341372 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 OTOP1Q7RTM1 612 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 NEDD1Q8NHV4 660 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 LPAR1Q92633 364 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 TGIF2Q9GZN2 237 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 SH2D4AQ9H788 454 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 SYNPO2Q9UMS6 1093 aa12.13□□□□□ -0.47
TPM3-207ENST00000341372 PRDM1O75626 825 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 PCP11498 1178 aaKnown RBP12.12□□□□□ -0.47
TPM3-207ENST00000341372 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
TPM3-207ENST00000341372 IER5LQ5T953 404 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 LBX2Q6XYB7 198 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 CAPN12Q6ZSI9 719 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 SKAP1Q86WV1 359 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 ZNF444Q8N0Y2 327 aaPredicted RBP12.12□□□□□ -0.47
TPM3-207ENST00000341372 SMCR8Q8TEV9 937 aaPredicted RBP12.12□□□□□ -0.47
TPM3-207ENST00000341372 RUFY2Q8WXA3 655 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 TATDN2Q93075 761 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 NBPF3Q9H094 633 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 VCPKMTQ9H867 229 aa12.12□□□□□ -0.47
TPM3-207ENST00000341372 SGSM2O43147 1006 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 GNRH1P01148 92 aa12.11□□□□□ -0.47
TPM3-207ENST00000341372 IRX3P78415 501 aaPredicted RBP12.11□□□□□ -0.47
TPM3-207ENST00000341372 ZYXQ15942 572 aaKnown RBP12.11□□□□□ -0.47
TPM3-207ENST00000341372 KIAA1755Q5JYT7 1200 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms