RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 STAT6P42226 847 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 FOXR1Q6PIV2 292 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 BICDL1Q6ZP65 573 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 GPATCH11Q8N954 259 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 LIMA1Q9UHB6 759 aaKnown RBP17.15■□□□□ 0.34
PERM1-201ENST00000341290 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 LRRIQ3A6PVS8 624 aaPredicted RBP17.15■□□□□ 0.34
PERM1-201ENST00000341290 ERLIN1O75477 346 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 KLK7P49862 253 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 ANKRD20A12PQ8NF67 263 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 RWDD2AQ9UIY3 292 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 EPN1Q9Y6I3 576 aaPredicted RBP17.15■□□□□ 0.34
PERM1-201ENST00000341290 DLEC1Q9Y238 1755 aa17.15■□□□□ 0.34
PERM1-201ENST00000341290 GSPT2Q8IYD1 628 aaKnown RBP17.14■□□□□ 0.33
PERM1-201ENST00000341290 ANKRD65E5RJM6 399 aa17.14■□□□□ 0.33
PERM1-201ENST00000341290 NDUFA10O95299 355 aa17.14■□□□□ 0.33
PERM1-201ENST00000341290 PARP1P09874 1014 aaKnown RBP17.14■□□□□ 0.33
PERM1-201ENST00000341290 CCDC24Q8N4L8 307 aa17.14■□□□□ 0.33
PERM1-201ENST00000341290 MSANTD4Q8NCY6 345 aa17.14■□□□□ 0.33
PERM1-201ENST00000341290 RAB21Q9UL25 225 aa17.14■□□□□ 0.33
PERM1-201ENST00000341290 FAM205AQ6ZU69 1335 aa17.14■□□□□ 0.33
PERM1-201ENST00000341290 EP400Q96L91 3159 aa17.14■□□□□ 0.33
PERM1-201ENST00000341290 GTPBP6O43824 516 aaPredicted RBP17.13■□□□□ 0.33
PERM1-201ENST00000341290 ATP1A1P05023 1023 aaKnown RBP17.13■□□□□ 0.33
PERM1-201ENST00000341290 SCG2P13521 617 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 EZH2Q15910 746 aaKnown RBP17.13■□□□□ 0.33
PERM1-201ENST00000341290 IRF2BP1Q8IU81 584 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 ERCC3P19447 782 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 SF3B2Q13435 895 aaKnown RBP17.13■□□□□ 0.33
PERM1-201ENST00000341290 EXOC4Q96A65 974 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 MMS19Q96T76 1030 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 TFCP2L1Q9NZI6 479 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 RTCBQ9Y3I0 505 aaKnown RBP17.13■□□□□ 0.33
PERM1-201ENST00000341290 DUSP10Q9Y6W6 482 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 KCNQ4P56696 695 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 MRPS25P82663 173 aaKnown RBP17.13■□□□□ 0.33
PERM1-201ENST00000341290 CCDC122Q5T0U0 273 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 ZNF658Q5TYW1 1059 aaPredicted RBP17.13■□□□□ 0.33
PERM1-201ENST00000341290 CCDC51Q96ER9 411 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 AGPAT5Q9NUQ2 364 aa17.13■□□□□ 0.33
PERM1-201ENST00000341290 RBM28Q9NW13 759 aaKnown RBP17.13■□□□□ 0.33
PERM1-201ENST00000341290 B4DLN1 442 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 RIN2Q8WYP3 895 aaPredicted RBP17.12■□□□□ 0.33
PERM1-201ENST00000341290 DRC1Q96MC2 740 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 ANAPC4Q9UJX5 808 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 COL4A1P02462 1669 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 ITIH6Q6UXX5 1313 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 TSPY2A6NKD2 308 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 SEMA3EO15041 775 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 ZNF185O15231 689 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 BMP15O95972 392 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 RCAN1P53805 252 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 CYP27A1Q02318 531 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 STAG2Q8N3U4 1231 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 HNRNPLLQ8WVV9 542 aaKnown RBP17.12■□□□□ 0.33
PERM1-201ENST00000341290 TRIM47Q96LD4 638 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 PCMTD1Q96MG8 357 aaPredicted RBP17.12■□□□□ 0.33
PERM1-201ENST00000341290 GEMIN8Q9NWZ8 242 aaKnown RBP17.12■□□□□ 0.33
PERM1-201ENST00000341290 LUC7L2Q9Y383 392 aaKnown RBP17.12■□□□□ 0.33
PERM1-201ENST00000341290 COL1A1P02452 1464 aaPredicted RBP17.12■□□□□ 0.33
PERM1-201ENST00000341290 ANKRD31Q8N7Z5 1873 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 A0A1B0GUL6 1792 aa17.12■□□□□ 0.33
PERM1-201ENST00000341290 LRRC10BA6NIK2 292 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 NKRFO15226 690 aaKnown RBP eCLIP17.11■□□□□ 0.337e-7■■■□□ 14.9
PERM1-201ENST00000341290 USP5P45974 858 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 ICE2Q659A1 982 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 KIAA1551Q9HCM1 1747 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 EIF3JO75822 258 aaKnown RBP17.11■□□□□ 0.33
PERM1-201ENST00000341290 AMPD2Q01433 879 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 EN1Q05925 392 aaPredicted RBP17.11■□□□□ 0.33
PERM1-201ENST00000341290 WHAMMP3Q1A5X7 153 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 HSP90B2PQ58FF3 399 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 TMEM60Q9H2L4 133 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 CPVLQ9H3G5 476 aa17.11■□□□□ 0.33
PERM1-201ENST00000341290 MACROD2A1Z1Q3 448 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 MUM1L1Q5H9M0 696 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 TYW1BQ6NUM6 668 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 KIAA1328Q86T90 577 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 MB21D1Q8N884 522 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 OR8K1Q8NGG5 319 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 GNL3LQ9NVN8 582 aaKnown RBP17.1■□□□□ 0.33
PERM1-201ENST00000341290 RCCD1A6NED2 376 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 MYCNP04198 464 aaPredicted RBP17.1■□□□□ 0.33
PERM1-201ENST00000341290 ACTN2P35609 894 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 HERVK_113P62684 666 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 PPP2R5BQ15173 497 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 INF2Q27J81 1249 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 CT47A1Q5JQC4 288 aaPredicted RBP17.1■□□□□ 0.33
PERM1-201ENST00000341290 HPS3Q969F9 1004 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 MTA3Q9BTC8 594 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 RRP15Q9Y3B9 282 aaKnown RBP17.1■□□□□ 0.33
PERM1-201ENST00000341290 GNPATO15228 680 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 NTSR2O95665 410 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 PRDX5P30044 214 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 SLC15A2Q16348 729 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 ERFEQ4G0M1 354 aa17.1■□□□□ 0.33
PERM1-201ENST00000341290 CAVIN4Q5BKX8 364 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms