RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 FNBP4Q8N3X1 1017 aaPredicted RBP10.52□□□□□ -0.73
TRERF1-201ENST00000340840 NOA1Q8NC60 698 aaKnown RBP10.52□□□□□ -0.73
TRERF1-201ENST00000340840 CENPHQ9H3R5 247 aa10.52□□□□□ -0.73
TRERF1-201ENST00000340840 SUGCTQ9HAC7 445 aa10.52□□□□□ -0.73
TRERF1-201ENST00000340840 SSBP05455 408 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 TCP1P17987 556 aaKnown RBP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 PRCPP42785 496 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 MAGEA1P43355 309 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 MAGEA9P43362 315 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 NAPAP54920 295 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 SLC20A2Q08357 652 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 NKX1-1Q15270 411 aaPredicted RBP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 CCDC40Q4G0X9 1142 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 SPTY2D1Q68D10 685 aaPredicted RBP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 C8orf74Q6P047 294 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 CCDC84Q86UT8 332 aaPredicted RBP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 CHP1Q99653 195 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 LRRC27Q9C0I9 530 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 SEC31BQ9NQW1 1179 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 TCRBV5S4A2TA0A5A2 114 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 ANO9A1A5B4 782 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 RDXP35241 583 aaKnown RBP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 CHRNDQ07001 517 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 FAM47AQ5JRC9 791 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 CABP7Q86V35 215 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 SPEF2Q9C093 1822 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 ZMYND10O75800 440 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 TSPY3P0CV98 308 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 TSPY8P0CW00 308 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 ERVK-24P63145 666 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 CFAP58Q5T655 872 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 WDR93Q6P2C0 686 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 GBP6Q6ZN66 633 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 ZNF622Q969S3 477 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 MAGEF1Q9HAY2 307 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 C6orf50Q9HD87 102 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 DISC1Q9NRI5 854 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 TARSL2A2RTX5 802 aaKnown RBP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 GYG1P46976 350 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 SLC4A8Q2Y0W8 1093 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 C2CD5Q86YS7 1000 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 MSL3Q8N5Y2 521 aaKnown RBP10.51□□□□□ -0.73
TRERF1-201ENST00000340840 SPATA20Q8TB22 786 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 COG1Q8WTW3 980 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 CUEDC2Q9H467 287 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 HYOU1Q9Y4L1 999 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 RGPD2P0DJD1 1756 aa10.51□□□□□ -0.73
TRERF1-201ENST00000340840 GOLGA8KD6RF30 607 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 TRIM66O15016 1216 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 N4BP1O75113 896 aaKnown RBP10.5□□□□□ -0.73
TRERF1-201ENST00000340840 KRT18P05783 430 aaKnown RBP10.5□□□□□ -0.73
TRERF1-201ENST00000340840 GNA11P29992 359 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 LETM2Q2VYF4 491 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 TYW1BQ6NUM6 668 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 EFCAB13Q8IY85 973 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 CNOT6LQ96LI5 555 aaKnown RBP10.5□□□□□ -0.73
TRERF1-201ENST00000340840 BRIP1Q9BX63 1249 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 ATRNO75882 1429 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 TULP2O00295 520 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 PSMD14O00487 310 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 HLTFQ14527 1009 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRERF1-201ENST00000340840 VPS72Q15906 364 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 NHEJ1Q9H9Q4 299 aaPredicted RBP10.5□□□□□ -0.73
TRERF1-201ENST00000340840 HDAC6Q9UBN7 1215 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 FAM184BQ9ULE4 1060 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 CAPN11Q9UMQ6 739 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 JRKLQ9Y4A0 524 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 CYP2D7A0A087X1C5 515 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 EIF3CLB5ME19 914 aaKnown RBP10.5□□□□□ -0.73
TRERF1-201ENST00000340840 CCNE1P24864 410 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 GALNT17Q6IS24 598 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 B4GALNT4Q76KP1 1039 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 SV2BQ7L1I2 683 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 SH3RF1Q7Z6J0 888 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 P2RX5Q93086 422 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 NOX5Q96PH1 765 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 EIF3CQ99613 913 aaKnown RBP10.5□□□□□ -0.73
TRERF1-201ENST00000340840 CAPS2Q9BXY5 557 aa10.5□□□□□ -0.73
TRERF1-201ENST00000340840 ARPP21Q9UBL0 812 aaPredicted RBP10.5□□□□□ -0.73
TRERF1-201ENST00000340840 TRIM49BA6NDI0 452 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 NDUFAB1O14561 156 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 SRGAP2O75044 1071 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 ZBTB7AO95365 584 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 ATP1A1P05023 1023 aaKnown RBP10.49□□□□□ -0.73
TRERF1-201ENST00000340840 MNAT1P51948 309 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 DYNLL1P63167 89 aaKnown RBP10.49□□□□□ -0.73
TRERF1-201ENST00000340840 SEMA3FQ13275 785 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 INF2Q27J81 1249 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 ODF2Q5BJF6 829 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 MAATS1Q7Z4T9 603 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 POTEDQ86YR6 584 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 IFT20Q8IY31 132 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.49□□□□□ -0.73
TRERF1-201ENST00000340840 FAM207AQ9NSI2 230 aaPredicted RBP10.49□□□□□ -0.73
TRERF1-201ENST00000340840 TSKSQ9UJT2 592 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 PCDHA4Q9UN74 947 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 LAD1O00515 517 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 BAG3O95817 575 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 GNGT1P63211 74 aa10.49□□□□□ -0.73
TRERF1-201ENST00000340840 CYP27A1Q02318 531 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms