RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 BCRP11274 1271 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 EPN1Q9Y6I3 576 aaPredicted RBP21.38■■□□□ 1.01
CDK13-202ENST00000340829 WHAMMP3Q1A5X7 153 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 SLFN12Q8IYM2 578 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.38■■□□□ 1.01
CDK13-202ENST00000340829 EPSTI1Q96J88 318 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 CNOT6LQ96LI5 555 aaKnown RBP21.38■■□□□ 1.01
CDK13-202ENST00000340829 PIGSQ96S52 555 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 SAMSN1Q9NSI8 373 aaKnown RBP21.38■■□□□ 1.01
CDK13-202ENST00000340829 MYO3AQ8NEV4 1616 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 TRIM58Q8NG06 486 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 U2AF1L4Q8WU68 220 aaKnown RBP21.38■■□□□ 1.01
CDK13-202ENST00000340829 TUBGCP2Q9BSJ2 902 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 NEDD4P46934 1319 aa21.38■■□□□ 1.01
CDK13-202ENST00000340829 USP17L3A6NCW0 530 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 USP17L4A6NCW7 530 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 ACTN4O43707 911 aaKnown RBP21.37■■□□□ 1.01
CDK13-202ENST00000340829 USP17L1Q7RTZ2 530 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 BSDC1Q9NW68 430 aaPredicted RBP21.37■■□□□ 1.01
CDK13-202ENST00000340829 KIAA1024Q9UPX6 916 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 BUB1O43683 1085 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 PLEKHA8P1O95397 391 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 POLR2FP61218 127 aaKnown RBP21.37■■□□□ 1.01
CDK13-202ENST00000340829 PTPROQ16827 1216 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 KCTD1Q719H9 257 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 TSKSQ9UJT2 592 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 NBPF26B4DH59 902 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 ALAS1P13196 640 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 SLC16A2P36021 539 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 NBPF10Q6P3W6 841 aaKnown RBP21.37■■□□□ 1.01
CDK13-202ENST00000340829 USP17L2Q6R6M4 530 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 CYB5R4Q7L1T6 521 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 NBPF15Q8N660 670 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 GPR101Q96P66 508 aaPredicted RBP21.37■■□□□ 1.01
CDK13-202ENST00000340829 HAUS4Q9H6D7 363 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 MYO1AQ9UBC5 1043 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 SRPRBQ9Y5M8 271 aaKnown RBP21.37■■□□□ 1.01
CDK13-202ENST00000340829 TICAM2Q86XR7 235 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 TBCKQ8TEA7 893 aa21.37■■□□□ 1.01
CDK13-202ENST00000340829 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.36■■□□□ 1.01
CDK13-202ENST00000340829 GRM1Q13255 1194 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 ADAM9Q13443 819 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 SPICE1Q8N0Z3 855 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 ATP1A3P13637 1013 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 ABCB4P21439 1286 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 RBL2Q08999 1139 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 TRPC3Q13507 836 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 ABCB5Q2M3G0 1257 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 EFCAB8A8MWE9 144 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 POLR2MP0CAP2 368 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 ANKRD13CQ8N6S4 541 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 LARP4BQ92615 738 aaKnown RBP21.36■■□□□ 1.01
CDK13-202ENST00000340829 TSNARE1Q96NA8 513 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 TESPA1A2RU30 521 aaPredicted RBP21.36■■□□□ 1.01
CDK13-202ENST00000340829 GABPB1Q06547 395 aaPredicted RBP21.36■■□□□ 1.01
CDK13-202ENST00000340829 C10orf67Q8IYJ2 551 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
CDK13-202ENST00000340829 NOP56O00567 594 aaKnown RBP21.35■■□□□ 1.01
CDK13-202ENST00000340829 STAT1P42224 750 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 PAK2Q13177 524 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 ASPRV1Q53RT3 343 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 LAD1O00515 517 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 FOXO4P98177 505 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 LIN9Q5TKA1 542 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 COA7Q96BR5 231 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 THRAP3Q9Y2W1 955 aaKnown RBP21.35■■□□□ 1.01
CDK13-202ENST00000340829 NLRX1Q86UT6 975 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 VTI1AQ96AJ9 217 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 GINS2Q9Y248 185 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 SYCE1Q8N0S2 351 aa21.35■■□□□ 1.01
CDK13-202ENST00000340829 TTLL1O95922 423 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 GPATCH4Q5T3I0 446 aaKnown RBP21.34■■□□□ 1.01
CDK13-202ENST00000340829 FBF1Q8TES7 1133 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 AGTPBP1Q9UPW5 1226 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 CPS1P31327 1500 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 PLA2G4DQ86XP0 818 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 LRRC45Q96CN5 670 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 DBNDD1Q9H9R9 158 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 USTQ9Y2C2 406 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 TRIM37O94972 964 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 BRD3Q15059 726 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 ZNF365Q70YC5 407 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 ISCA1Q9BUE6 129 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 NDUFAB1O14561 156 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 LRRC41Q15345 812 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 MCTP2Q6DN12 878 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 MAGEF1Q9HAY2 307 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 SERPINB13Q9UIV8 391 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 MRPL11Q9Y3B7 192 aaKnown RBP21.34■■□□□ 1.01
CDK13-202ENST00000340829 NEXMIFQ5QGS0 1516 aa21.34■■□□□ 1.01
CDK13-202ENST00000340829 BBOX1O75936 387 aa21.33■■□□□ 1.01
CDK13-202ENST00000340829 FAM178BQ8IXR5 827 aa21.33■■□□□ 1.01
CDK13-202ENST00000340829 CCDC63Q8NA47 563 aa21.33■■□□□ 1.01
CDK13-202ENST00000340829 RPGRIP1Q96KN7 1286 aa21.33■■□□□ 1.01
CDK13-202ENST00000340829 AMNQ9BXJ7 453 aa21.33■■□□□ 1.01
CDK13-202ENST00000340829 COMMD10Q9Y6G5 202 aa21.33■■□□□ 1.01
CDK13-202ENST00000340829 ZNF354CQ86Y25 554 aa21.33■■□□□ 1.01
CDK13-202ENST00000340829 MB21D2Q8IYB1 491 aaPredicted RBP21.33■■□□□ 1.01
CDK13-202ENST00000340829 ENOX1Q8TC92 643 aaKnown RBP21.33■■□□□ 1.01
CDK13-202ENST00000340829 IPO4Q8TEX9 1081 aaKnown RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms