RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CNGB1Q14028 1251 aaPredicted RBP14.24□□□□□ -0.13
ATXN3-201ENST00000340660 WDR78Q5VTH9 848 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 RNF180Q86T96 592 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 TBC1D22AQ8WUA7 517 aa14.24□□□□□ -0.13
ATXN3-201ENST00000340660 CSF1RP07333 972 aa14.23□□□□□ -0.13
ATXN3-201ENST00000340660 CDK7P50613 346 aa14.23□□□□□ -0.13
ATXN3-201ENST00000340660 CRIPAKQ8N1N5 446 aa14.23□□□□□ -0.13
ATXN3-201ENST00000340660 MRGPRX2Q96LB1 330 aa14.23□□□□□ -0.13
ATXN3-201ENST00000340660 MAST3O60307 1309 aa14.22□□□□□ -0.13
ATXN3-201ENST00000340660 DDTLA6NHG4 134 aaPredicted RBP14.22□□□□□ -0.13
ATXN3-201ENST00000340660 ACLYP53396 1101 aa14.22□□□□□ -0.13
ATXN3-201ENST00000340660 SKOR1P84550 965 aa14.22□□□□□ -0.13
ATXN3-201ENST00000340660 UBE3BQ7Z3V4 1068 aa14.22□□□□□ -0.13
ATXN3-201ENST00000340660 PLA2G12BQ9BX93 195 aa14.22□□□□□ -0.13
ATXN3-201ENST00000340660 SH2B1Q9NRF2 756 aaPredicted RBP14.22□□□□□ -0.13
ATXN3-201ENST00000340660 DLL3Q9NYJ7 618 aa14.22□□□□□ -0.13
ATXN3-201ENST00000340660 GCN1Q92616 2671 aaKnown RBP14.21□□□□□ -0.13
ATXN3-201ENST00000340660 MROH7Q68CQ1 1323 aa14.21□□□□□ -0.13
ATXN3-201ENST00000340660 RARBP10826 455 aa14.21□□□□□ -0.13
ATXN3-201ENST00000340660 MTMR2Q13614 643 aa14.21□□□□□ -0.13
ATXN3-201ENST00000340660 FAM126BQ8IXS8 530 aa14.21□□□□□ -0.13
ATXN3-201ENST00000340660 LENG1Q96BZ8 264 aaPredicted RBP14.21□□□□□ -0.13
ATXN3-201ENST00000340660 PLEKHF1Q96S99 279 aa14.21□□□□□ -0.13
ATXN3-201ENST00000340660 DACH1Q9UI36 760 aa14.21□□□□□ -0.13
ATXN3-201ENST00000340660 ANKRD18BA2A2Z9 1011 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 FAM196BA6NMK8 535 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 ADAMTS4O75173 837 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 RGS3P49796 1198 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 ZXDAP98168 799 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 TTLL4Q14679 1199 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 NUP133Q8WUM0 1156 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 TBC1D2Q9BYX2 928 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 USP40Q9NVE5 1235 aa14.2□□□□□ -0.14
ATXN3-201ENST00000340660 TTC24A2A3L6 582 aaPredicted RBP14.19□□□□□ -0.14
ATXN3-201ENST00000340660 H7C1W4 665 aa14.19□□□□□ -0.14
ATXN3-201ENST00000340660 HOXB7P09629 217 aa14.19□□□□□ -0.14
ATXN3-201ENST00000340660 CCL23P55773 120 aa14.19□□□□□ -0.14
ATXN3-201ENST00000340660 RRP1BQ14684 758 aaKnown RBP14.19□□□□□ -0.14
ATXN3-201ENST00000340660 DIXDC1Q155Q3 683 aa14.19□□□□□ -0.14
ATXN3-201ENST00000340660 SNIP1Q8TAD8 396 aaKnown RBP14.19□□□□□ -0.14
ATXN3-201ENST00000340660 GTF3C2Q8WUA4 911 aaPredicted RBP14.19□□□□□ -0.14
ATXN3-201ENST00000340660 TSEN34Q9BSV6 310 aaKnown RBP14.19□□□□□ -0.14
ATXN3-201ENST00000340660 FAM50BQ9Y247 325 aa14.19□□□□□ -0.14
ATXN3-201ENST00000340660 SUGT1Q9Y2Z0 365 aa14.19□□□□□ -0.14
ATXN3-201ENST00000340660 IVNS1ABPQ9Y6Y0 642 aa14.19□□□□□ -0.14
ATXN3-201ENST00000340660 RFX7Q2KHR2 1363 aa14.19□□□□□ -0.14
ATXN3-201ENST00000340660 USP17L5A8MUK1 530 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 WNT7BP56706 349 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 BACE1P56817 501 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 CCNA1P78396 465 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 CWF19L2Q2TBE0 894 aaKnown RBP14.18□□□□□ -0.14
ATXN3-201ENST00000340660 FBXO33Q7Z6M2 555 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 DPP9Q86TI2 863 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 ZSCAN29Q8IWY8 852 aaPredicted RBP14.18□□□□□ -0.14
ATXN3-201ENST00000340660 KIAA2013Q8IYS2 634 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 ASIC4Q96FT7 647 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 WNT8AQ9H1J5 351 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 RABGAP1Q9Y3P9 1069 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 SMCHD1A6NHR9 2005 aa14.18□□□□□ -0.14
ATXN3-201ENST00000340660 COBLO75128 1261 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 ENTPD3O75355 529 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 CD4P01730 458 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 SMPD1P17405 629 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 ADORA2AP29274 412 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 UBE4AQ14139 1066 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 MCTP2Q6DN12 878 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 CCSAPQ6IQ19 270 aaPredicted RBP14.17□□□□□ -0.14
ATXN3-201ENST00000340660 OSBPL5Q9H0X9 879 aaPredicted RBP14.17□□□□□ -0.14
ATXN3-201ENST00000340660 HIPK3Q9H422 1215 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 SUGCTQ9HAC7 445 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 TMOD4Q9NZQ9 345 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 MAP3K2Q9Y2U5 619 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 SPEGQ15772 3267 aa14.17□□□□□ -0.14
ATXN3-201ENST00000340660 ZNF236Q9UL36 1845 aa14.16□□□□□ -0.14
ATXN3-201ENST00000340660 LCHNA4D1U4 455 aa14.16□□□□□ -0.14
ATXN3-201ENST00000340660 NEFMP07197 916 aa14.16□□□□□ -0.14
ATXN3-201ENST00000340660 CASP7P55210 303 aa14.16□□□□□ -0.14
ATXN3-201ENST00000340660 PRR7Q8TB68 274 aa14.16□□□□□ -0.14
ATXN3-201ENST00000340660 POP1Q99575 1024 aaKnown RBP14.16□□□□□ -0.14
ATXN3-201ENST00000340660 IDI2Q9BXS1 227 aa14.16□□□□□ -0.14
ATXN3-201ENST00000340660 ELP1O95163 1332 aa14.15□□□□□ -0.14
ATXN3-201ENST00000340660 ROBO3Q96MS0 1386 aa14.15□□□□□ -0.14
ATXN3-201ENST00000340660 ARVCFO00192 962 aa14.15□□□□□ -0.14
ATXN3-201ENST00000340660 CHL1O00533 1208 aa14.15□□□□□ -0.14
ATXN3-201ENST00000340660 CCNYL3P0C7X3 344 aa14.15□□□□□ -0.14
ATXN3-201ENST00000340660 SMAD2Q15796 467 aaKnown RBP14.15□□□□□ -0.14
ATXN3-201ENST00000340660 KCNA10Q16322 511 aa14.15□□□□□ -0.14
ATXN3-201ENST00000340660 KLHDC9Q8NEP7 349 aa14.15□□□□□ -0.14
ATXN3-201ENST00000340660 ZNF594Q96JF6 807 aaPredicted RBP14.15□□□□□ -0.14
ATXN3-201ENST00000340660 DDX4Q9NQI0 724 aaKnown RBP14.15□□□□□ -0.14
ATXN3-201ENST00000340660 ATAD5Q96QE3 1844 aa14.15□□□□□ -0.14
ATXN3-201ENST00000340660 MYADML2A6NDP7 307 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 NEURL1BA8MQ27 555 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 J3QL48 77 aa14.14□□□□□ -0.15
ATXN3-201ENST00000340660 FRAT2O75474 233 aaPredicted RBP14.14□□□□□ -0.15
ATXN3-201ENST00000340660 ZIC2O95409 532 aaPredicted RBP14.14□□□□□ -0.15
ATXN3-201ENST00000340660 PDGFBP01127 241 aaPredicted RBP14.14□□□□□ -0.15
ATXN3-201ENST00000340660 HSPA5P11021 654 aaKnown RBP14.14□□□□□ -0.15
ATXN3-201ENST00000340660 SMCPP49901 116 aaPredicted RBP14.14□□□□□ -0.15
ATXN3-201ENST00000340660 PDE4DQ08499 809 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms