RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TTC19Q6DKK2 380 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-201ENST00000340437 NOC4LQ9BVI4 516 aaKnown RBP16.13■□□□□ 0.17
CPSF7-201ENST00000340437 DISC1Q9NRI5 854 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 MYH7P12883 1935 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 LMTK3Q96Q04 1460 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 MYH2Q9UKX2 1941 aa16.13■□□□□ 0.17
CPSF7-201ENST00000340437 NKRFO15226 690 aaKnown RBP eCLIP16.13■□□□□ 0.17
CPSF7-201ENST00000340437 PLEKP08567 350 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-201ENST00000340437 PFKFB3Q16875 520 aaPredicted RBP16.13■□□□□ 0.17
CPSF7-201ENST00000340437 LAMB4A4D0S4 1761 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 H7C1D1 291 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 MAP2K7O14733 419 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 PPP2R5BQ15173 497 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 IRF2BP1Q8IU81 584 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 EXOC1Q9NV70 894 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 ZNF219Q9P2Y4 722 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-201ENST00000340437 RCCD1A6NED2 376 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 SSBP05455 408 aaKnown RBP eCLIP16.12■□□□□ 0.17
CPSF7-201ENST00000340437 HIBADHP31937 336 aaKnown RBP16.12■□□□□ 0.17
CPSF7-201ENST00000340437 ACTN2P35609 894 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 RNASE9P60153 205 aaKnown RBP16.12■□□□□ 0.17
CPSF7-201ENST00000340437 DDB1Q16531 1140 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 PARP10Q53GL7 1025 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 TXNRD3Q86VQ6 643 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 ZNF444Q8N0Y2 327 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-201ENST00000340437 TNFRSF25Q93038 417 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 EXOC4Q96A65 974 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 CRACR2AQ9BSW2 395 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 GBP3Q9H0R5 595 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 POLD4Q9HCU8 107 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 DDAH1O94760 285 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 SLC7A5Q01650 507 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 KCTD19Q17RG1 926 aaPredicted RBP16.12■□□□□ 0.17
CPSF7-201ENST00000340437 MAPKAPK5Q8IW41 473 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 NSUN4Q96CB9 384 aaKnown RBP16.12■□□□□ 0.17
CPSF7-201ENST00000340437 MYH8P13535 1937 aa16.12■□□□□ 0.17
CPSF7-201ENST00000340437 TXKP42681 527 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 NAPAP54920 295 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 HERVK_113P62684 666 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 TGFBRAP1Q8WUH2 860 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 C8orf37Q96NL8 207 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 KRT86O43790 486 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 RNF40O75150 1001 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 PLCG1P19174 1290 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 CCDC42Q96M95 316 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 UBXN6Q9BZV1 441 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 ACBD3Q9H3P7 528 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 NHEJ1Q9H9Q4 299 aaPredicted RBP16.11■□□□□ 0.17
CPSF7-201ENST00000340437 TCP11L1Q9NUJ3 509 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 EHD2Q9NZN4 543 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 ANKIB1Q9P2G1 1089 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 LRWD1Q9UFC0 647 aa16.11■□□□□ 0.17
CPSF7-201ENST00000340437 MYO1CO00159 1063 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 ADSSL1Q8N142 457 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 FEZ2Q9UHY8 353 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-201ENST00000340437 SEMA3EO15041 775 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 CALML3P27482 149 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 ARID5AQ03989 594 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 STK4Q13043 487 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 SPA17Q15506 151 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 CABP7Q86V35 215 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 C2CD5Q86YS7 1000 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 CNOT6LQ96LI5 555 aaKnown RBP16.1■□□□□ 0.17
CPSF7-201ENST00000340437 BRIP1Q9BX63 1249 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 BIN2Q9UBW5 565 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-201ENST00000340437 CYLC1P35663 651 aaPredicted RBP16.1■□□□□ 0.17
CPSF7-201ENST00000340437 EIF6P56537 245 aaKnown RBP16.1■□□□□ 0.17
CPSF7-201ENST00000340437 ANKRD40Q6AI12 368 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 MSANTD4Q8NCY6 345 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 GOLGA5Q8TBA6 731 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 CCDC47Q96A33 483 aaKnown RBP16.1■□□□□ 0.17
CPSF7-201ENST00000340437 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 MLXIPQ9HAP2 919 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 ANAPC4Q9UJX5 808 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 PCDHA4Q9UN74 947 aa16.1■□□□□ 0.17
CPSF7-201ENST00000340437 LGALS16A8MUM7 142 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 MARCH6O60337 910 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 LONP1P36776 959 aaKnown RBP16.09■□□□□ 0.17
CPSF7-201ENST00000340437 SMARCC1Q92922 1105 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-201ENST00000340437 HAUS4Q9H6D7 363 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 RRP15Q9Y3B9 282 aaKnown RBP16.09■□□□□ 0.17
CPSF7-201ENST00000340437 PKD1L3Q7Z443 1732 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 KIF5AQ12840 1032 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 LRRC41Q15345 812 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 EZH2Q15910 746 aaKnown RBP16.09■□□□□ 0.17
CPSF7-201ENST00000340437 PTPROQ16827 1216 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 TXNRD1Q16881 649 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 NAALADL2Q58DX5 795 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 WDR59Q6PJI9 974 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 BCL9O00512 1426 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 AKR1B10O60218 316 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 KRT83P78385 493 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 TRIM14Q14142 442 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.09■□□□□ 0.17
CPSF7-201ENST00000340437 KANSL2Q9H9L4 492 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 SRP68Q9UHB9 627 aaKnown RBP16.09■□□□□ 0.17
CPSF7-201ENST00000340437 ZNF652Q9Y2D9 606 aa16.09■□□□□ 0.17
CPSF7-201ENST00000340437 UBE4AQ14139 1066 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms