RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 PDE4BQ07343 736 aa19.44■□□□□ 0.7
H3F3C-201ENST00000340398 CCDC144BQ3MJ40 725 aa19.44■□□□□ 0.7
H3F3C-201ENST00000340398 ZNF467Q7Z7K2 595 aaPredicted RBP19.44■□□□□ 0.7
H3F3C-201ENST00000340398 CHST13Q8NET6 341 aa19.44■□□□□ 0.7
H3F3C-201ENST00000340398 AGBL1Q96MI9 1066 aa19.44■□□□□ 0.7
H3F3C-201ENST00000340398 NAPBQ9H115 298 aa19.44■□□□□ 0.7
H3F3C-201ENST00000340398 ERC2O15083 957 aa19.43■□□□□ 0.7
H3F3C-201ENST00000340398 C6orf222P0C671 652 aaPredicted RBP19.43■□□□□ 0.7
H3F3C-201ENST00000340398 SMAD3P84022 425 aaKnown RBP19.43■□□□□ 0.7
H3F3C-201ENST00000340398 CTDSPL2Q05D32 466 aa19.43■□□□□ 0.7
H3F3C-201ENST00000340398 LRRFIP1Q32MZ4 808 aaKnown RBP19.43■□□□□ 0.7
H3F3C-201ENST00000340398 ANKRD33Q7Z3H0 272 aa19.43■□□□□ 0.7
H3F3C-201ENST00000340398 CCDC144CPQ8IYA2 1237 aa19.43■□□□□ 0.7
H3F3C-201ENST00000340398 NUP133Q8WUM0 1156 aa19.43■□□□□ 0.7
H3F3C-201ENST00000340398 VTI1AQ96AJ9 217 aa19.43■□□□□ 0.7
H3F3C-201ENST00000340398 ABHD16BQ9H3Z7 469 aa19.43■□□□□ 0.7
H3F3C-201ENST00000340398 DDX49Q9Y6V7 483 aaKnown RBP19.43■□□□□ 0.7
H3F3C-201ENST00000340398 MOXD2PA6NHM9 499 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 DCDC2CA8MYV0 355 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 FOXP2O15409 715 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 NMT2O60551 498 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 ASGR1P07306 291 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 KCTD1Q719H9 257 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.42■□□□□ 0.7
H3F3C-201ENST00000340398 ARMCX2Q7L311 632 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 RASGRP2Q7LDG7 609 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.42■□□□□ 0.7
H3F3C-201ENST00000340398 RNPC3Q96LT9 517 aaKnown RBP19.42■□□□□ 0.7
H3F3C-201ENST00000340398 TOX2Q96NM4 488 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 KATNBL1Q9H079 304 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 IL17RBQ9NRM6 502 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 FBXO40Q9UH90 709 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 SYNPO2Q9UMS6 1093 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 ZNF536O15090 1300 aa19.42■□□□□ 0.7
H3F3C-201ENST00000340398 VCANP13611 3396 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.41■□□□□ 0.7
H3F3C-201ENST00000340398 SOWAHBA6NEL2 793 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 SLC3A2P08195 630 aaKnown RBP19.41■□□□□ 0.7
H3F3C-201ENST00000340398 PTGS1P23219 599 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 SLC1A4P43007 532 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 CDK7P50613 346 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 STAT2P52630 851 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 OAZ1P54368 228 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 FPGSQ05932 587 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 IKQ13123 557 aaPredicted RBP19.41■□□□□ 0.7
H3F3C-201ENST00000340398 CHURC1Q8WUH1 139 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 STAG1Q8WVM7 1258 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 MYLIPQ8WY64 445 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 COL25A1Q9BXS0 654 aaPredicted RBP19.41■□□□□ 0.7
H3F3C-201ENST00000340398 MTMR7Q9Y216 660 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 PRUNE2Q8WUY3 3088 aa19.41■□□□□ 0.7
H3F3C-201ENST00000340398 CTAGE5O15320 804 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 TIMP1P01033 207 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 MX1P20591 662 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 GJA9P57773 515 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 BEX3Q00994 111 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 GNASQ5JWF2 1037 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 VPS53Q5VIR6 699 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 CCDC174Q6PII3 467 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 FAM133AQ8N9E0 248 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 GLT1D1Q96MS3 346 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 RNF146Q9NTX7 359 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 STX8Q9UNK0 236 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.4■□□□□ 0.7
H3F3C-201ENST00000340398 PLIN4Q96Q06 1357 aa19.4■□□□□ 0.7
H3F3C-201ENST00000340398 TSPY2A6NKD2 308 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 ALAS1P13196 640 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 CST5P28325 142 aaPredicted RBP19.39■□□□□ 0.69
H3F3C-201ENST00000340398 ANKRD45Q5TZF3 282 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 RCSD1Q6JBY9 416 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 FAM160B2Q86V87 743 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 PCSK9Q8NBP7 692 aaKnown RBP19.39■□□□□ 0.69
H3F3C-201ENST00000340398 GMCL1Q96IK5 515 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 TRERF1Q96PN7 1200 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 UPF3AQ9H1J1 476 aaKnown RBP19.39■□□□□ 0.69
H3F3C-201ENST00000340398 ACAD9Q9H845 621 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 SPC25Q9HBM1 224 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 A1CFQ9NQ94 594 aaKnown RBP19.39■□□□□ 0.69
H3F3C-201ENST00000340398 ELP1O95163 1332 aa19.39■□□□□ 0.69
H3F3C-201ENST00000340398 FDX1P10109 184 aa19.38■□□□□ 0.69
H3F3C-201ENST00000340398 MUM1L1Q5H9M0 696 aa19.38■□□□□ 0.69
H3F3C-201ENST00000340398 TMEM63BQ5T3F8 832 aa19.38■□□□□ 0.69
H3F3C-201ENST00000340398 NOL8Q76FK4 1167 aaKnown RBP19.38■□□□□ 0.69
H3F3C-201ENST00000340398 C16orf59Q7L2K0 433 aa19.38■□□□□ 0.69
H3F3C-201ENST00000340398 PURBQ96QR8 312 aaKnown RBP19.38■□□□□ 0.69
H3F3C-201ENST00000340398 SALL3Q9BXA9 1300 aa19.38■□□□□ 0.69
H3F3C-201ENST00000340398 TBX21Q9UL17 535 aa19.38■□□□□ 0.69
H3F3C-201ENST00000340398 PRR12Q9ULL5 1215 aa19.38■□□□□ 0.69
H3F3C-201ENST00000340398 ASTN1O14525 1302 aa19.37■□□□□ 0.69
H3F3C-201ENST00000340398 ARVCFO00192 962 aa19.37■□□□□ 0.69
H3F3C-201ENST00000340398 RANBP6O60518 1105 aaKnown RBP19.37■□□□□ 0.69
H3F3C-201ENST00000340398 TNFAIP2Q03169 654 aa19.37■□□□□ 0.69
H3F3C-201ENST00000340398 TTBK2Q6IQ55 1244 aa19.37■□□□□ 0.69
H3F3C-201ENST00000340398 MAFAQ8NHW3 353 aaPredicted RBP19.37■□□□□ 0.69
H3F3C-201ENST00000340398 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.37■□□□□ 0.69
H3F3C-201ENST00000340398 PDGFCQ9NRA1 345 aa19.37■□□□□ 0.69
H3F3C-201ENST00000340398 MFSD5Q6N075 450 aa19.36■□□□□ 0.69
H3F3C-201ENST00000340398 CXCL17Q6UXB2 119 aa19.36■□□□□ 0.69
H3F3C-201ENST00000340398 EEPD1Q7L9B9 569 aa19.36■□□□□ 0.69
H3F3C-201ENST00000340398 PPP1R12CQ9BZL4 782 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms